KEGG   Rattus norvegicus (rat): 310090
Entry
310090            CDS       T01003                                 
Symbol
Ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
  KO
K13982  probable ATP-dependent RNA helicase DDX4 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    310090 (Ddx4)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     310090 (Ddx4)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    310090 (Ddx4)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 310090
NCBI-ProteinID: NP_001071115
RGD: 1308793
Ensembl: ENSRNOG00000026686
UniProt: Q64060 A0A8I5ZVB9
Position
2:complement(45961174..46016097)
AA seq 713 aa
MGDEDWEAEILKPHVSSYVPVFEKDKYSSGANGDTFNRTSASSSEMEDGPSGRDHFMRSG
FSSGRNLGNRDIGESSKRETTSTTGGFGRGKGFGNRGFLNNKFEEGDSSGFWKESTNDCE
DTQTRSRGFSKRGGYPDGNDSEASGPFRRGGRDSEYDQDQGSQRGGGLFGSRKPAASDSG
SGDTFQSRSGNGRGGYKGLNEEVVTGSGKNSWKSEAEGGESSDIQGPKVTYIPPPPPEDE
DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ
KYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTR
ELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKI
GLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEF
LKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADF
IATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINF
DLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWLEEIA
FSSYAPPSFSNSTRGAVFASVDTRKNFQGKNTLNTAGISSAQAPNPVDDESWD
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgggagatgaagattgggaggcagaaatcctcaaacctcatgtgtcttcctacgttcct
gtatttgagaaggataaatattcttctggggcaaatggagacacttttaacaggacttca
gcttcatcatcagaaatggaagatggaccttctggaagagatcatttcatgagaagtgga
ttttcctctggaagaaatttaggaaacagagatattggcgagtctagtaaaagagagact
acatctacaaccggtggctttggaagaggaaagggttttggaaacagaggttttttaaat
aacaagtttgaagaaggtgacagctctggtttctggaaagagtctactaatgactgtgaa
gatactcagactcggagcagagggttttccaagcgaggcggctatccagatgggaatgat
tcggaagcttcaggcccattcagaagaggtggaagagatagtgaatatgaccaagatcag
ggatcacagcgtggtggtggcctttttggttctaggaaaccagcagcaagtgattcaggc
agtggtgacactttccagagcagaagtgggaatggccgaggtggctacaaaggcttaaat
gaagaagtagtaacaggctctggaaagaattcttggaagtcagaagctgaaggaggcgaa
agcagtgatattcaaggtccaaaagtgacatatataccccctcctccaccagaggatgag
gactccatctttgcacattatcagacaggcataaactttgataaatatgataccatactt
gttgaagtatctggacatgatgcaccaccggcaattttgacttttgaagaagcgaatctc
tgccagaccctgaataacaacattgctaaggctggctataccaagctcactcctgtgcag
aagtacagcattcccattgtgttagcaggaagagatttgatggcttgtgctcaaacaggg
tctgggaagacggcagcttttctcttgcctattttggctcatatgatgagggatggaata
actgccagtcgctttaaagaactgcaggaaccagagtgtattattgtagcaccaactcga
gaattgatcaaccaaatttatttggaagccagaaaattttcttttgggacttgtgtaaga
gctgttgtcatatatggaggaacccagtttgggcactcaattcgacagatagtgcaaggg
tgtaatatattatgtgctactccagggaggctgatggatatcataggcaaagaaaagatt
ggtctcaaacaagtcaagtacttagttttggatgaagctgatcgaatgttggatatgggt
tttggacccgaaatgaagaagttaatttcttgtccaggaatgccatcaaaggaacagcgc
caaactcttttattcagtgcaacttttccagaagaaatccagaggttggctggcgagttt
ttaaagtcaaattatttgtttgttgctgttggacaagtgggaggagcttgcagagatgtg
cagcagtccattcttcaagttggccagtattcaaaaagagaaaaacttgttgagattcta
cgaaacataggtgatgaaagaactatggtctttgttgaaaccaagaaaaaagcagatttc
attgcgacttttctttgtcaagaaaaaatatcaactacaagtattcatggcgatcgggaa
cagagggagcgagaacaagctcttggagattttcgctgtggaaagtgcccagttcttgtt
gctacttcagtggctgccagaggacttgatattgaaaatgttcaacatgttatcaatttt
gaccttccttctaccattgatgaatatgttcatcgaattggacgtactggacgttgtgga
aatactggcagggcgatttctttttttgataccgaatctgataatcatttagcacaacct
ctagttaaagtactgtcagatgctcaacaggatgttcctgcgtggttagaagagattgcc
tttagttcatatgcgcctcccagcttcagtaatagcacaagaggggctgtgtttgcatct
gttgacactaggaagaatttccagggcaagaacacactgaacacagctgggatttcttct
gcacaagctcccaatccagttgatgacgagtcatgggattaa

  All links  
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (19)   
   RefSeq(nuc) (13)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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