KEGG   Rattus norvegicus (rat): 362285
Entry
362285            CDS       T01003                                 

Symbol
Col9a3
Name
(RefSeq) collagen type IX alpha 3 chain precursor
  KO
K08131  collagen type IX alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno04974  Protein digestion and absorption
rno05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    362285 (Col9a3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    362285 (Col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    362285 (Col9a3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    362285 (Col9a3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    362285 (Col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    362285 (Col9a3)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   362285 (Col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 362285
NCBI-ProteinID: NP_001102081
RGD: 1310255
Ensembl: ENSRNOG00000009531
Position
3
AA seq 680 aa
MTGAPALALLLLGQLLTATSAQKVGPRGPPGPQGPPGKPGKDGIDGEAGPPGLPGPPGPK
GTSGKPGKPGEAGLPGLPGVDGLTGRDGPAGPKGAPGERGSLGPPGPPGLGGKGLPGPPG
EAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGNPGVLPEGATDLQCPAICPPGPPG
PPGMPGFKGPTGYKGEQGEVGKDGEKGNPGPPGPPGIPGTVGLQGPRGLQGLPGPLGPPG
DRGPIGFRGPPGIPGAPGKAGDRGDRGPEGFRGPKGDLGRPGPKGIPGVAGPGGEPGMPG
KDGKDGVPGLDGEKGEAGRTGAPGEKGPNGLPGLPGRAGSKGEKGEVGRTGELGEAGPSG
EPGIPGDVGVPGERGEAGHRGSVGALGPQGPPGAPGIRGFQGQKGSIGDPGLPGPQGLRG
DVGDRGPGGATGPKGDQGIAGSDGLPGDKGELGPNGPVGQKGESGSRGELGPKGIQGPNG
TSGVQGVPGPPGPLGFQGVQGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQLAAHL
RKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDK
GAIGVGLDGPAGDQGYRGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAAGAQGTPGICDT
SACQGAVLGGGGEKSGPRSS
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgaccggagcgcctgccctagccctgctgctgctggggcagctcctgacggccacctcc
gcgcagaaagtgggacctcgaggcccccctggtccccaagggcctcctggaaaacccggc
aaggatggcatcgatggagaagctggccctccaggtctgcctggccctccaggacccaaa
gggacctcagggaagccggggaagccgggagaggcaggactgccaggactgcctggtgta
gatggtctgacagggagagatggacccgcaggacccaaaggtgccccgggagaacgggga
agtctaggacctccagggccaccaggacttggaggcaaaggcctccctggacctcctgga
gaggcaggagtgagtggcctcccaggtgggattggtctacgtggccccccgggaccctct
ggacttccaggcctgcctggccccccaggacctcctggacctcctggaaaccctggagtc
ctccctgaaggtgctactgatctgcagtgtcctgccatctgccctccaggccctccaggg
cccccaggaatgccggggttcaaggggcctactggctacaaaggggaacaaggagaagtc
ggcaaagatggtgagaagggtaatcctggcccccctggacctccaggaatcccaggcact
gtggggctacagggcccaagaggattgcaaggacttccagggccacttggaccccctggg
gaccggggtcccattgggtttcggggccccccagggatcccaggagcacctgggaaagcg
ggtgacaggggtgataggggaccagaagggttccgtggccctaagggtgacctgggcagg
cctggtcccaaaggaatccctggagtggctgggccaggcggagaaccaggcatgccaggc
aaggatggcaaggacggtgtgccgggacttgacggtgagaagggagaggctggtcgcact
ggtgccccaggagaaaaaggccccaatgggctgccggggctccctggacgagcagggtcc
aaaggcgagaagggagaagtgggtagaactggggagctgggcgaggctggcccctctgga
gaaccaggtattcctggagacgttggtgttccgggggagcgtggcgaggctggtcacagg
ggctcagtgggggccctcggcccacaaggtcctcctggggctcctggcattcgtggcttc
cagggccaaaaaggcagcataggagaccctggccttccaggcccccaaggcctacgggga
gatgtgggtgaccggggtccaggaggtgccacaggtcctaagggagaccagggcatcgcg
ggttctgatggtcttccaggggacaaaggagagctgggtcctaatggccccgttggacaa
aaaggagagtccggcagccgaggggaactgggccccaaaggcatccagggccccaatggt
accagtggggtccagggtgtgcctggtcccccaggtccactgggcttccaaggcgtgcag
ggtgtcccaggcatcacggggaaacctggagttccgggcaaggaagccagtgaacaacgc
atcagggagctgtgtggggggatgatcagtgagcaaattgcacagctggctgcacacctg
aggaagcccttagcaccaggctccattggcaggcctggtccagctggccccccaggccct
ccaggccccccaggctccattggccaccctggcgctcggggtcctcctggataccgtggt
cccactggggaactaggagatcctggaccaagaggaagccagggtgacagaggagacaag
ggagcaataggtgtagggttggatggacctgctggggaccagggctaccgagggcctcaa
ggtgtgcctggcatcagcaaagatggtcgagatggtgctcatggtgagcctggccttcct
ggtgatcctggccttcctggagctgctggtgctcaaggaaccccggggatttgcgacacc
tcagcctgccaaggagctgtgttagggggaggtggggaaaagtcaggtcctcggagctca
taa

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