KEGG   Rattus norvegicus (rat): 502129Help
Entry
502129            CDS       T01003                                 

Gene name
Hist1h2ai, RGD1562827
Definition
(RefSeq) histone cluster 1, H2ai
  KO
K11251  histone H2A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04217  Necroptosis
rno05034  Alcoholism
rno05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    502129 (Hist1h2ai)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    502129 (Hist1h2ai)
  09165 Substance dependence
   05034 Alcoholism
    502129 (Hist1h2ai)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    502129 (Hist1h2ai)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    502129 (Hist1h2ai)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic Type
  Nucleosome assembly factors
   Histones
    502129 (Hist1h2ai)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   502129 (Hist1h2ai)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF Ribosomal_L27A
Motif
Other DBs
NCBI-GeneID: 502129
NCBI-ProteinID: XP_001061350
RGD: 1562827
Ensembl: ENSRNOG00000059748
UniProt: G3V9C0
Position
17p11
AA seq 130 aa AA seqDB search
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
TESHHKAKGK
NT seq 393 nt NT seq  +upstreamnt  +downstreamnt
atgtctggacgtgggaagcagggcggcaaggctcgcgccaaggccaagacccggtcctcc
cgggcgggcctgcagtttcccgtgggccgcgtgcaccgtctgctgcgtaagggcaactat
tcggagcgggtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacg
gccgagatcctggagctggcgggcaacgcagcgagggacaacaagaagacgcgcatcatc
ccgcgccacctgcagctggccatccgcaacgacgaggagctcaacaagctgctgggccgc
gtgaccatcgcacagggcggcgttctgccaaacatccaggcggtgctgctgcccaagaag
accgagagccaccacaaggctaaggggaagtaa

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