KEGG   Rattus norvegicus (rat): 83572
Entry
83572             CDS       T01003                                 
Symbol
Pafah1b1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit alpha
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00565  Ether lipid metabolism
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    83572 (Pafah1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    83572 (Pafah1b1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    83572 (Pafah1b1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    83572 (Pafah1b1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   83572 (Pafah1b1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EML NBCH_WD40 Beta-prop_SCAP Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 LisH Beta-prop_DCAF12 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Nucleoporin_N Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 83572
NCBI-ProteinID: NP_113951
RGD: 620331
Ensembl: ENSRNOG00000002755
Vega: OTTRNOG00000002069
UniProt: P63004 A6HGN1
Position
10:complement(60031441..60090259)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaggcatattccgtttttaaaaaggaagctgaactagatatgaat
gaagaattagataagaagtatgctggtcttttggaaaaaaaatggacatctgttattaga
ttacaaaaaaaggtaatggaattagaatcaaaactaaatgaagcaaaagaagaatttacg
tcaggtggtcctcttggtcagaaacgagacccaaaagaatggattccccgtccacctgag
aaatatgcattgagtggtcataggagtccagttactcgagtcattttccatcctgtgttc
agtgttatggtctctgcttcagaggatgctacaattaaggtgtgggattatgagactgga
gattttgagcgaactctcaaggggcatacagattctgtacaggacatttcctttgaccac
agtggcaaactcttggcttcctgttctgcagatatgacgattaaattatgggattttcag
ggttttgaatgcatcagaaccatgcacggccacgaccacaatgtctcttcagtagccatc
atgcctaatggagatcatatagtgtctgcctcaagggataaaactataaaaatgtgggaa
gtgcaaactggctactgtgtgaagacattcacaggacacagagaatgggtacgtatggtg
cggccaaatcaggacggcactctgatagccagctgttccaatgaccagactgtgcgtgta
tgggttgtagcaacaaaggaatgcaaagctgagctccgagaacacgaacatgtggtagaa
tgcatttcctgggctccagaaagttcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagtggcaagcctggacccttcttgctatctggttccagagacaaaactatt
aagatgtgggacgtcagtactggcatgtgccttatgactctggtgggtcatgataattgg
gtacgtggagttctgttccattctggggggaagtttattttgagttgtgctgatgacaag
accctccgtgtatgggattacaagaacaagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccataagacggcaccctatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga

  All links  
Gene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (15)   
   RefSeq(nuc) (9)   
   GenBank (3)   
   EMBL (3)   
Protein domain (43)   
   Pfam (43)   
All databases (76)   

Download RDF
DBGET integrated database retrieval system