KEGG   Rattus norvegicus (rat): 83572
Entry
83572             CDS       T01003                                 

Gene name
Pafah1b1, LIS1
Definition
(RefSeq) platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00565  Ether lipid metabolism
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    83572 (Pafah1b1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    83572 (Pafah1b1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    83572 (Pafah1b1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Spindle formation proteins
    83572 (Pafah1b1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   83572 (Pafah1b1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Nup160 LisH eIF2A Nucleoporin_N Pox_A_type_inc LisH_2
Other DBs
NCBI-GeneID: 83572
NCBI-ProteinID: NP_113951
RGD: 620331
Ensembl: ENSRNOG00000002755
Vega: OTTRNOG00000002069
UniProt: P63004
Position
10q24
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaggcatattccgtttttaaaaaggaagctgaactagatatgaat
gaagaattagataagaagtatgctggtcttttggaaaaaaaatggacatctgttattaga
ttacaaaaaaaggtaatggaattagaatcaaaactaaatgaagcaaaagaagaatttacg
tcaggtggtcctcttggtcagaaacgagacccaaaagaatggattccccgtccacctgag
aaatatgcattgagtggtcataggagtccagttactcgagtcattttccatcctgtgttc
agtgttatggtctctgcttcagaggatgctacaattaaggtgtgggattatgagactgga
gattttgagcgaactctcaaggggcatacagattctgtacaggacatttcctttgaccac
agtggcaaactcttggcttcctgttctgcagatatgacgattaaattatgggattttcag
ggttttgaatgcatcagaaccatgcacggccacgaccacaatgtctcttcagtagccatc
atgcctaatggagatcatatagtgtctgcctcaagggataaaactataaaaatgtgggaa
gtgcaaactggctactgtgtgaagacattcacaggacacagagaatgggtacgtatggtg
cggccaaatcaggacggcactctgatagccagctgttccaatgaccagactgtgcgtgta
tgggttgtagcaacaaaggaatgcaaagctgagctccgagaacacgaacatgtggtagaa
tgcatttcctgggctccagaaagttcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagtggcaagcctggacccttcttgctatctggttccagagacaaaactatt
aagatgtgggacgtcagtactggcatgtgccttatgactctggtgggtcatgataattgg
gtacgtggagttctgttccattctggggggaagtttattttgagttgtgctgatgacaag
accctccgtgtatgggattacaagaacaagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccataagacggcaccctatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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