KEGG   Blautia obeum: CK5_33520
Entry
CK5_33520         CDS       T02605                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
rob  Blautia obeum
Pathway
rob03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CK5_33520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rob03400]
    CK5_33520
DNA repair and recombination proteins [BR:rob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CK5_33520
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CK5_33520
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_21 AAA_29 nSTAND1 RsgA_GTPase AAA_22 nSTAND3 AAA_24 Viral_helicase1 cobW AAA_25 DnaJ_CXXCXGXG Nuc_deoxyrib_tr Zn_Tnp_IS91
Other DBs
NCBI-ProteinID: CBL24546
UniProt: D4LUT8
Position
3421217..3424057
AA seq 946 aa
MAERTSGKKFIKIRGANVNNLKNLSVDIPRDEFVVLTGVSGSGKSSLAFDTIYAEGQRRY
MESLSSYARQFLGQMEKPDVESIEGLPPAISIDQKSTNRNPRSTVGTVTEIYDYFRLLYA
RIGIPHCPKCGKEIKKQTVDQMVDHIMALPERTKLQLLAPVVRGRKGTHAKLLEQAKKSG
YVRVQIDGNLYELSEEIKLDKNIKHNIEVIVDRLVVKPGIEKRLSDSIETVLDLSDGLLM
VDTMDGNIRTFSQSFACPDCQISIDEIEPRSFSFNNPFGACPDCFGLGYKMEFDIDLMIP
DKSLSISQGAIAVMGWQSCTDKGSFTRAILDALAKEYRFSLDTPFEDYPDKIKDILIHGT
NGHAVKVYYKGQRGEGIYDVAFPGLIKNVEQRYRETGSDAMKQEYETFMRITPCKSCKGQ
RLKKESLAVTVGERNIYELTALSVAKLKVFMEELKLTEQQELIGKQILKEIRARVGFLAE
VGLDYLSLSRATATLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDRLLRALM
RLRDLGNSLIVVEHDEDTMRAADCVVDIGPGAGEHGGELVEIGTAEALMKNPRSVTGAYL
SGRCKIPVPSERKAPTGWLKIRGAAENNLKQVNVDIPLGIMTCVTGVSGSGKSSLINEVL
YKTLARDLNRARVIPGKHKEIQGLDQLDKVISIDQSPIGRTPRSNPATYTGVFDQIRDLF
ASTADAKARGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLADVYVPCEVCKGRRYNRET
LEVKYKDKSIYDVLNMTVEEALTFFENIPSIRRKIQTLYDVGLSYIRLGQPSTELSGGEA
QRIKLATELSKRSTGRTIYILDEPTTGLHFADVHKLVEILQRLTENGNTVVVIEHNLDVI
KTADYIVDMGPEGGDCGGTVVATGTPEEIAGCPDSYTGQYVAKYLK
NT seq 2841 nt   +upstreamnt  +downstreamnt
atggcagaacgaacatcggggaaaaaatttattaagatcagaggggcaaatgtcaacaat
cttaagaatttaagcgtggacattccaagggacgaatttgtggtactgacaggtgtcagt
ggttccggtaagtcttcgctggcttttgatacaatttatgcggaagggcagagacggtac
atggaatctctgtcgtcatatgcgagacagttcctgggacagatggaaaaaccggatgtg
gaatcgatcgagggacttcctccggcaatctctattgaccagaaatcgaccaacagaaac
ccacgttctaccgtaggaactgttacagaaatttatgattatttccgactgctgtatgca
cgtatcggtattcctcactgcccgaaatgtggcaaagaaatcaagaagcaaactgtcgat
cagatggtagaccatattatggcactgccggagcggacgaaactgcagctgctggcaccg
gttgtccgcggtcgtaagggtacccacgcaaaacttctggaacaggcaaagaaaagtggc
tatgtaagggtgcagattgatggcaatctttatgaactttccgaggaaatcaagctggat
aagaatatcaagcataatattgaggtcattgtagaccgtctggtggtcaaaccgggaatc
gaaaagcgcttgtctgattctattgagacagtgctggatctgtcagatgggcttcttatg
gtcgatacgatggatggtaatatccgtacattcagtcagagttttgcatgcccggattgt
cagatcagtattgatgagattgaaccgagaagtttttctttcaacaatccgttcggtgca
tgcccggactgttttggtctcggatacaaaatggaatttgacattgatctgatgataccg
gataaatccttaagcatctcgcagggcgcgatcgctgtaatgggctggcagtcctgtacg
gataagggaagctttacgagagcaattctggatgctcttgcaaaagaatacaggttcagt
ctggacacaccgtttgaagactacccagacaagataaaagatattctgatccatggtaca
aacggtcatgcagtcaaagtttattataaaggtcagagaggagagggaatctatgatgtt
gcttttccgggcctgataaaaaatgtcgagcagagataccgtgagacaggatctgatgcg
atgaagcaggaatacgaaacttttatgcgcattactccgtgtaagtcatgtaaaggccag
cgtctgaaaaaggaatctctggcagtaactgtgggtgaacgtaatatctatgagctgact
gcactttccgtagcgaaacttaaagtttttatggaagaactgaagctgacggagcaacag
gagctgatcggaaaacagattctgaaagaaattcgtgcaagagtaggttttcttgcagaa
gtcggactggattacctgtctctgagccgtgcgacagcaacgctttccgggggcgaggca
cagaggatccgacttgcgacacagattggttccggactggtcggagttgcgtacattctg
gatgagccgagtatcggtcttcatcagagagataatgacagacttcttcgtgcgttgatg
cgccttcgtgatctcggaaacagcctgatcgtggtcgagcatgatgaagatacaatgcgt
gcggcagactgcgtggtggatatcggaccgggagccggcgaacatggcggagaactcgta
gaaatcggcacagctgaggcgcttatgaagaatccgcgttctgtgacaggagcatactta
agtggcaggtgcaagattccggtaccttctgaacgtaaagcgccgaccggatggctgaag
atccggggagcagcagaaaacaatctgaaacaggtaaatgttgatattccgcttggcatt
atgacatgtgtgacaggtgtgagcggatccggcaagagttctctgatcaacgaggttctg
tacaagacactggcacgcgatctgaaccgtgcaagagtgattccgggtaaacacaaagag
attcaggggctggatcagcttgataaggtgatcagcatcgatcagtcaccgatcggaagg
acaccgagatctaatccggctacttatacaggtgtgtttgatcagatccgtgatttgttt
gcatcgacagcagatgcaaaggcaagaggttacaagaaaggccgtttcagctttaatgtc
aagggtggacgatgcgaagcctgcagtggagacggcatcatcaaaatcgagatgcatttc
cttgccgatgtctatgtaccgtgcgaggtctgcaagggcagacgctacaacagagagaca
ctggaagtcaaatataaagacaagagcatttatgatgtgctgaacatgacggtggaagaa
gcgctgactttctttgagaatattccgtctatccgcagaaagatccagacactctatgat
gtgggactttcctatattcgtctgggacagccgtccacggagctttccggcggtgaggca
cagcgaatcaagcttgcgacagaactgagtaagagaagcaccggacgtacaatctatatt
ctggatgagccgacgacaggactccattttgcagatgtacacaagttggtagaaatcctg
cagcgactgactgaaaatggaaatacggtcgttgtcattgaacataatctggatgttatc
aagactgcagattacattgttgacatgggaccggaaggcggcgactgtggcggcacggtt
gttgcaaccggtacaccggaagaaattgcaggatgcccggattcttataccggccaatat
gtggctaaatatcttaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (136)   
   KEGG ORTHOLOGY (1)   
   RefGene (133)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (159)   

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