KEGG   Rickettsia prowazekii Breinl: H375_6500
Entry
H375_6500         CDS       T02543                                 
Name
(GenBank) Nucleoid-associated protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
rpl  Rickettsia prowazekii Breinl
Pathway
rpl03030  DNA replication
rpl03430  Mismatch repair
rpl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H375_6500
   03430 Mismatch repair
    H375_6500
   03440 Homologous recombination
    H375_6500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpl03032]
    H375_6500
   03400 DNA repair and recombination proteins [BR:rpl03400]
    H375_6500
Enzymes [BR:rpl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H375_6500
DNA replication proteins [BR:rpl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H375_6500
DNA repair and recombination proteins [BR:rpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H375_6500
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 AAA_14 RuvB_N AAA_5 AAA_19 AAA_30 AAA_24 AAA_assoc_2 AAA_18 RNA_helicase AAA_16 Viral_helicase1 TIP49 ResIII
Other DBs
NCBI-GeneID: 15151412
NCBI-ProteinID: AGJ02875
Position
complement(786459..788084)
AA seq 541 aa
MRRSDLRSLLLLHKEDRLPLLSAMTKTTSITIIIVLENSSNQYIPFARKYRPSNFTELQG
QEVLVKILSYTILNDRLVGGYLLTGIRGIGKTTSARIIAKAVNCSALITENTAIKTCEKC
TNCVSFNNHNHPDIIEIDAASKTSIDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSKGAF
NALLKTLEEPPPHVIFIFATTEVQKVPSTIISRCQRYDLRRLSFEEIFKLLQYITKQENL
IADVEALRIIAHKSEGSARDAVSILDQAASMSAKSGNIISPQIINQMLGLVDTSFILEFI
ENIISRETEKAINLINKLYYGFSINLETFIKSVADFIAYLNKVKILPNYSLPIYESFNYR
TKSILDKISLPHLSILWQIYNKGVTEIKISYNQLIETEMLVIKSIYSTSLPLLNDSNANI
MNADNSGIKKIEILDFLEYLYKNNEIDIYYFLLNHTELKKLSDNRLELYSLEVTHKLKKQ
IEDLLAAFTKEKPEFIVIKEQNKQTLKGQLINKIETSNDFSLIKKHFPNVKITDILLKIK
G
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgcgacgaagtgatctcagaagtttattattacttcataaagaagaccgtcttccttta
ctatcagcaatgacaaaaacgacatcaataacaatcataattgtgctagaaaattcatct
aatcaatatattccttttgcaaggaaatatcgtcctagcaattttactgaactgcaaggg
caagaagtactagtaaaaattttaagctatactattttaaacgatagactagtcggaggt
tatcttttaactggtattagaggtattggcaaaactacctcagctcgtattattgctaaa
gccgtaaattgttctgcattaattactgaaaatacggctattaaaacatgcgaaaaatgc
acaaattgtgtcagttttaataatcataatcatccagatataattgaaattgacgcagca
agtaaaactagcatagatgatatacgtcgaattatagaatctgctgaatataaacctcta
caaggtaaacataaaatcttcattattgatgaagtgcatatgctctctaaaggagcattt
aacgcacttcttaaaactttagaagaaccgccacctcacgtaatatttatttttgcaaca
actgaagtacaaaaggtaccttcaactattatctcaagatgtcaacgttatgatttaaga
cgtttaagttttgaagaaatctttaaactacttcaatatataactaaacaagaaaattta
atagctgatgtagaagcattaagaattatagctcataagtctgaagggtcagcacgtgat
gcagtatctattttagatcaagcagctagtatgtctgcaaaatctggtaatataattagt
cctcaaataattaatcaaatgcttggacttgttgacacttcatttatattagaatttata
gaaaatataattagcagagaaacagaaaaagctataaatttaatcaataaactttattat
ggtttttcgattaatcttgagacttttataaaatcggtagcagattttattgcttatctt
aacaaagtaaaaatattacctaattatagtttaccaatatacgaatcatttaattatagg
actaaaagcatattagataaaatcagtttaccacacttatcaatcttatggcaaatatat
aataagggagttacagaaataaaaatttcctataatcaactaatagagacggaaatgtta
gttataaaatctatatattcaacgtcactgccactactaaatgattctaatgctaatata
atgaatgcagataattcaggaataaaaaaaattgaaattttagattttcttgaatatcta
tataaaaataatgagatagatatatattattttttgctcaatcatacagaacttaaaaag
ctcagcgataatagattagagctctatagtcttgaagttacacacaaactaaaaaaacaa
atagaagatttattagctgcttttactaaagaaaagcctgaatttatagtaataaaagag
caaaataaacaaaccttaaagggtcagttaataaataagattgaaacaagtaacgatttt
agtttaataaaaaaacattttccgaatgtaaaaattacagatatattactaaaaattaaa
ggatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

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