KEGG   Rickettsia rickettsii Arizona: RPO_04485
Entry
RPO_04485         CDS       T01721                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rra  Rickettsia rickettsii Arizona
Pathway
rra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RPO_04485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rra03400]
    RPO_04485
Enzymes [BR:rra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RPO_04485
DNA repair and recombination proteins [BR:rra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RPO_04485
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII PriA_CRR Helicase_C AAA_30 nSTAND3 UvrD-helicase AAA_11 T2SSE
Other DBs
NCBI-ProteinID: AFB25094
Position
complement(760738..762684)
AA seq 648 aa
MRIAKILLPVAKLFPLDYLIPEDLELNIGDLVVVPFRNKELTGIVWELVSNSEAKKIKTI
RAKVPLNLNITSEVLELIKWMSSYYMSELGSIAKLVLPMDIAEKPIKVKEQKVNNNFVLP
DLSEEQKQAVTILNESNKPTLVKGVTGSGKTEIYFHLIADYLAKGKQVLVMLPEIALSTQ
IINRFIERFGFEPIIWNSSVTKAHKKMILRGILSDKVKVVIGARSSLFLPFKNLGLIVID
EEHDDSYKQDDGILYNARDTAIVRGTFDKAQIVLCSATPSIETIHNIEIGKYQLVTLVNR
YKNVDLPNIEIIDMTKEKLSKNSYLSKLLIEAIKGNLDNKKQVLLFLNRRGYAPLMLCKA
CGHRLTCKFCSSWMVVHKATKKLECHHCGYQSKIFSSCPECLEDETLTICGPGIERIEEE
AKALFPESKIAVISKDHAKSPEKIAQLLHQMENLEIDILIGTQIITKGYHFPNLTLVGVI
DADLGSNNADLRASERTFQLLHQVGGRAGRGDSKGVVYLQSYYPDNTIFSYVKAGDEDSF
FANELEIRKSADMPPFSKTASVILSGSSEAKILEIARDMVRIAPKANVKILGPASSLMSK
LAGKYRYRILIIADKKFNLQKYLKFWLSLIKIPSFCHLKIDIDPKSFY
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgcgaatagcaaaaatattattaccggtagcaaaattatttccgctagattatttaata
cctgaagatttagagctaaacataggtgatcttgttgtagtgccttttagaaataaggaa
ttaaccggcatagtatgggagcttgtttcaaattccgaggcaaaaaaaataaaaactatt
agagcgaaagtaccgttaaacttaaatattacttcagaagttttagaattaattaaatgg
atgagtagctactatatgtcagagcttgggagcatagccaagttagtattacctatggat
attgctgaaaaaccgattaaagttaaggagcagaaagtcaataataactttgtgctacct
gatttgtcagaagagcagaaacaagcagtaacaattttaaatgaaagtaataagccaaca
cttgttaaaggtgttacgggatcaggtaaaacagaaatatattttcatctaatagcagat
tacttagcaaaaggcaaacaagtgcttgttatgttgcctgaaattgctttaagtacacaa
attattaatcgttttatagagcgattcggttttgagcctatcatatggaactcaagcgtt
accaaagctcacaagaaaatgattttaagaggtatattaagcgataaagttaaagtagta
attggggctagaagtagtttgtttttaccttttaaaaatctcggtttaatagttatagat
gaggaacatgacgattcctataaacaagatgacggtatattatataatgctagggatacg
gctatcgtgagaggtacatttgataaagcacaaattgttttgtgttcggcaacaccgtct
attgaaacgatacataatatagaaattggtaaatatcaattggttacattggttaataga
tacaaaaatgtcgatttgccaaatatagaaataatcgacatgactaaagaaaagctatct
aagaattcctatttatccaagcttcttatagaagctatcaaaggtaatttagataataaa
aagcaagtcttattatttcttaataggcgtggttatgctccgctcatgctatgcaaagct
tgcggtcacagattgacctgtaaattctgctcttcttggatggtagtacataaagcgact
aaaaaacttgaatgtcaccattgcggttatcaaagtaaaatttttagttcttgtcctgaa
tgtctagaggatgaaacattaactatatgtggtccaggtatagagagaatagaggaagaa
gcaaaagcactttttcctgagagtaaaattgcagtgataagtaaagatcatgctaaaagc
ccggaaaaaatagcacagcttctacatcaaatggaaaatttagaaattgatattttaata
ggcacacaaataataacaaaaggttatcactttccgaatcttactttagttggagtaata
gatgccgatcttggaagcaataatgccgatcttagagcatctgagcgaacttttcagcta
ctacatcaggtaggtggtagagcgggtagaggagatagtaaaggtgtagtatatttacaa
agctattatcctgataatacaatttttagttatgttaaagccggtgatgaagatagtttt
tttgcaaatgaacttgaaataagaaaatcagcagatatgccgccattttccaaaacagca
tcggtaattttgtcaggttccagtgaagctaaaattctagaaattgctagggatatggtc
cgaattgcaccaaaagcaaacgtgaaaattttaggaccggcaagctcattaatgtcaaag
ctcgctggtaaatatcgttaccgaatacttattatagccgataagaaatttaatttgcag
aaatatttaaaattttggctaagccttataaaaattccttctttttgccatctaaaaata
gatatcgatcctaaaagtttttattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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