KEGG   Candidatus Endomicrobium trichonymphae Rs-D17: TGRD_039
Entry
TGRD_039          CDS       T00755                                 
Name
(GenBank) type I restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rsd  Candidatus Endomicrobium trichonymphae Rs-D17
Brite
KEGG Orthology (KO) [BR:rsd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rsd02048]
    TGRD_039
Enzymes [BR:rsd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TGRD_039
Prokaryotic defense system [BR:rsd02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TGRD_039
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD AAA_16 AAA_19
Other DBs
NCBI-ProteinID: BAG13522
UniProt: B1GZ40
Position
75619..78621
AA seq 1000 aa
MPIKTKEETFENEIENILLKNGYIKGNPADYDKKYALDTALLFKFLQNSQSKEWGKLVNK
YGDGAEKSFLRRLGRELESKGMLYLLRNGIIDTPAKFELCFFEPASNMNETDIENYKKNI
LSITRQVHYSLKNENSIDMVIFINGLPVSTIELKNPVAGQTVENAKRQYKYDRDPSDLLL
SFKIRCLVHFAADTDEIYMTTKLCGADTYFLPFNKGSGHGKGNPLNSRGYRTSYLWEDVL
QKDSLLDIIRRFIHLEVKDKKENIIFPRYHQLDTVRKLIADVKANGLGKNYLIQHSAGSG
KSNSIAWLAHHLQNLHNADDKIIFNSIVVVTDRKVLDRQLQDTIYQFEHIDGVVAKIDVN
SKQLAEALSAGRKIIITTLQKFPFVLEEVENLRELKGKRFAVIIDEAHSSQTGEASSKLK
AVLGDDTAGLSECEKLQKTADEEAKEEKNIPDSEDIIIKEMKTHGRLKNLSFFAFTATPK
PATIEMFGNKGDDGKPKAFHLYSMRQAVEEGFILDVLKNYMTYTTYFRLGKAIANDPRYD
KSRANKALGKFLSLHPHNLAQKTQIIVEHFRSVTKNKICGKAKAMVVTSSRLHAVRYYFE
FKKYIKKMGYQKELRVLVAFSGTVSDEGKECTEQKLNNIKETELKEKFKGTDYQILLVAE
KYQTGYDEPLLHTMFIDKKLGGVKAVQTLSRLNRICPGKEDTFILDFVNSEEDIKKSFEP
YYKAADIEETTDANIVYDIKSKLDEFRIYWDTEIENFANVFFKPSKKQENLDFSILNSYI
DPAVERYKGKNEEEQEEFKSNLTKFVRAYSFISNIIKLDDVKMHKFFAYSKYLLRKLPKD
KRDEVNLNDEITLQYYRVQKIFEGSIILEEENNPLKNYKYVSKVDTKYETASLSELIEKL
NERFGTDFTGMDKMLQQFIADMGKDENLHKQAMNNSKEHFKFPFNDAFMTIVVDRMVQNK
EFCERILDDEKFGKTVKELLSGYMYDRLRKTDSVKIELDK
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgcctataaaaacaaaagaagaaacttttgaaaatgaaatagaaaatattcttcttaaa
aacggatatattaaaggcaatcctgcggattatgataaaaaatatgccttagatactgct
ttgctttttaaatttttgcaaaacagccagtcgaaagaatgggggaaacttgtaaataaa
tacggagatggtgctgaaaaaagttttttaagacgacttggcagagaactggaatccaaa
ggtatgttatacctcttacgtaacggtattatagatactccggcaaaatttgagctttgt
ttctttgaacctgcaagtaatatgaacgagacagatattgaaaattacaaaaaaaatatt
ttatcgattacaaggcaggtacattacagtcttaaaaatgaaaactctatagatatggtg
atatttattaacggtttgcctgtttctacaatagaacttaaaaaccctgttgccggccag
actgtagagaatgcaaaaagacagtataaatacgacagagatccaagcgatctgttatta
agttttaaaataagatgtcttgtccattttgcagcagatactgatgaaatttatatgacg
actaaactttgcggcgcagatacatattttctgccatttaataaaggcagcggacatgga
aaaggcaaccctttaaactctcgcggttatagaacgtcttatctatgggaagacgttctg
caaaaagacagtctgctcgatattatacgtcgctttatacatttagaagttaaagataaa
aaagaaaatattattttcccgcgttatcatcaattagacacagtcagaaaacttattgca
gatgttaaagcaaatggtttaggtaaaaattatcttatacagcatagtgctggaagcggt
aaatcaaactctatagcatggcttgcgcatcatctgcaaaacctgcataatgctgatgat
aaaattatattcaacagtattgttgtagttacagatcgaaaagtgttagaccgtcagctt
caagataccatatatcagtttgagcatatagacggcgttgttgctaaaattgatgttaat
tctaaacagcttgcagaagctttaagtgcaggcaggaaaattataataaccactttgcag
aaatttccttttgtgcttgaagaagtagagaatttaagagaattgaaaggaaaacgcttt
gccgttattattgacgaggcgcactcttcccaaaccggcgaagccagtagtaagctgaaa
gccgtgctgggcgacgatactgcaggtctgtctgaatgcgaaaaactgcagaaaacagca
gatgaagaagccaaagaagaaaaaaatattcctgacagcgaagatattatcataaaagaa
atgaaaacgcacggtagactaaaaaacctttccttttttgcctttaccgcaacgccgaaa
cctgcaacgattgaaatgttcggcaataagggagacgacggcaagccgaaagcatttcat
ttgtatagtatgagacaggcggtagaagaaggatttattttagacgtgcttaaaaattat
atgacatatacaacatacttccggctaggtaaagccatagcgaatgatccaagatatgat
aaaagtagagccaacaaagcgcttggtaaatttctaagtttgcatcctcacaatttagct
caaaaaacacagataatagtggagcattttcgttctgttactaaaaataaaatatgtgga
aaagcaaaagctatggttgtgacgagttcaagactccatgctgtccgctattattttgag
tttaaaaaatatattaagaaaatgggatatcaaaaagagcttagagttttggtagcattt
tcaggaacagtaagtgacgagggaaaagagtgtactgagcaaaaattaaataatataaag
gaaacagaacttaaagaaaaatttaaaggaactgactatcagatattattggttgctgag
aaatatcaaacaggttatgatgaacctttactgcatacaatgtttattgataaaaaactc
ggcggagttaaagcggttcaaacgctgtccagattaaaccgcatctgtcccggcaaagag
gatacttttatattagattttgtaaacagcgaagaagatataaaaaaatcttttgaaccg
tattacaaagccgccgatatagaagaaactacagatgctaatatagtttatgatattaaa
tcgaaactcgatgaatttagaatatattgggatacggaaattgagaattttgccaatgtt
ttttttaaaccgtcaaagaaacaggagaatttagatttttctatactcaatagttatatt
gatccggctgtcgaaagatataaaggcaaaaatgaagaagaacaggaagagtttaaatca
aatcttacaaaatttgtacgcgcctattcattcataagcaatataataaaattagatgat
gtaaaaatgcataaattttttgcttattctaaatatttattgagaaaacttccaaaagac
aaaagagatgaagttaatcttaatgatgaaataacattgcagtattatagagtacaaaag
atttttgaaggaagcattattttagaagaagaaaacaatccgctcaaaaactataaatat
gtcagtaaggttgatacaaaatatgaaacggcttcattatcggaactgatagaaaaactt
aacgaacgttttggaacagattttacagggatggataaaatgttgcagcaatttatagct
gatatgggaaaagatgaaaatttacacaagcaagcaatgaataattctaaagagcatttt
aaatttccgtttaatgatgcttttatgactattgttgttgaccgtatggtgcagaataaa
gaattttgtgaacgaatacttgatgacgagaaatttggtaaaactgttaaagaacttctg
tcaggttatatgtacgatagattgagaaagacagattccgtaaaaattgaactagataaa
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (61)   

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