KEGG   Raphanus sativus (radish): 108806363
Entry
108806363         CDS       T06014                                 
Name
(RefSeq) THO complex subunit 5A
  KO
K13174  THO complex subunit 5
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108806363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108806363
   03041 Spliceosome [BR:rsz03041]
    108806363
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108806363
Spliceosome [BR:rsz03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108806363
SSDB
Motif
Pfam: FmiP_Thoc5 Tsp45I
Other DBs
NCBI-GeneID: 108806363
NCBI-ProteinID: XP_018433960
UniProt: A0A6J0JEB6
Position
1:20102642..20104396
AA seq 424 aa
MAKDTMAASQKPPLELLRESKSSIEEIIARMLSIKKQGTPKSENRELLTQMFLNFINLRQ
ANRAILIEEERVKTETESPIDLTALQLHNLMYEKSHYLKATTSSREFKSKYPNIDLISEQ
DFFTDAPQPIKSQSLSNHDLMLKRLNFELHQRKEVCKLRAELEQRKKSLLEANAERSKFL
STLPLLLKSLKKASLPVQSQLCLPSPKKLRYHDLAELLPPPLYVVYSKFMAQKEAFEERI
DVEVSGSLKDAQSYAKQQAESSDDDNGKRQRKRPRTESSDEAVHPLKLVLHVYEDETPDP
KSRKLVMLKFEYLLKLNVVCVGIEESQDGLEKNILCNLFPDDAGLEPPHQSTKLILGDDH
AFDESTTSRPYKWAQHLAGIEVLPEMSPFVTGKDTQNSDTASVSDQHNVQTVLRRIRSQK
KGGM
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcaaaagacacgatggctgcttcccagaaaccgccgctagagctactccgagaaagc
aaatcctccatcgaagaaatcatcgcgaggatgctctccatcaagaaacagggaaccccc
aaatccgagaatcgcgaactcctcacccagatgtttctcaacttcatcaacctccgtcag
gcgaatcgtgcgattctgattgaagaagagagagtgaaaacagagacggagtctccaatt
gatttgactgcattgcagcttcacaatctcatgtacgagaagagccattacctcaaagcc
accacatcctccagagaattcaaatccaagtaccccaacatcgatctcatatccgaacaa
gacttcttcacagacgctccccaaccaatcaaatctcaatccctctcaaaccatgatctg
atgcttaaaagactcaactttgagctccatcagaggaaagaggtgtgcaagcttcgagct
gagttggaacaacgtaagaagtctttgctggaagctaacgcggagcgtagcaagttcctg
tccactcttccgttgcttctcaagtctctcaagaaagcgtctttgccagtacagagccag
ctgtgtttgcccagtcccaagaagcttaggtatcatgatctagctgagcttcttcctccg
ccgctttacgtcgtttattcaaagttcatggctcagaaggaagcttttgaagagaggata
gatgtcgaggtgtctgggagtcttaaggatgctcagagttatgctaagcagcaagcagag
agctctgatgatgataatggaaaaaggcaaaggaagcgacccaggacagagagttcagat
gaagcagtccatcctcttaaacttgtcctccacgtttatgaggatgagactccagatccg
aagtcacgtaagcttgttatgctcaagtttgagtacttgttgaagttgaatgttgtatgt
gttggcattgaagagtctcaggatggactagagaaaaatatcctgtgcaacttgtttcca
gacgatgctgggcttgagcctcctcatcagtctaccaagctcattcttggtgatgatcat
gcctttgatgagagcacaacatcgaggccatataagtgggcacaacatttggctgggatc
gaagttttacctgaaatgtcaccgtttgtaactggcaaggatactcaaaacagtgataca
gcttctgtatccgatcagcacaatgtgcagactgttctaagaaggatacggtctcagaaa
aaagggggtatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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