KEGG   Raphanus sativus (radish): 108808395
Entry
108808395         CDS       T06014                                 
Name
(RefSeq) syntaxin-125
  KO
K08486  syntaxin 1B/2/3
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    108808395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108808395
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108808395
Membrane trafficking [BR:rsz04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    108808395
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   108808395
  Exosomal proteins of other body fluids (saliva and urine)
   108808395
SSDB
Motif
Pfam: Syntaxin SNARE COG6_N Syntaxin-6_N CCDC-167 CD225 DUF6041 Helo_like_N Erp_C Stonustoxin_helical HTH_25 DUF1664 Syntaxin_2
Other DBs
NCBI-GeneID: 108808395
NCBI-ProteinID: XP_018436056
UniProt: A0A6J0JM23
Position
1:complement(4908896..4910303)
AA seq 298 aa
MNDLFSNSFKRNQAQMSDVEAGQETMNLDKFFEDVENVKDDMKGVETLYKKLQGSNEECK
TVHNANKVKELRAKMDADVGQVLKRVKIIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEKADEQTIDNLIASGESEN
FMQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPAMPHIMLMLK
NT seq 897 nt   +upstreamnt  +downstreamnt
atgaatgacttattctcaaattcattcaagcggaaccaggctcaaatgagcgatgtcgag
gcaggtcaagaaacgatgaacctcgacaaattcttcgaggacgtggagaatgtcaaagat
gacatgaaaggagtcgagactctttataagaagcttcaaggctcgaacgaggaatgcaag
acggtgcacaacgccaataaggtgaaggagctacgcgctaagatggatgctgacgtaggt
caggttcttaagagggtcaaaatcattaagcagaagctcgaagccctagagaaagccaac
gctaatagccgtaacgtcccgggttgtgggcccggttcgtctacggataggactcggtct
tctgtggtcagcggtctcgggaagaagctcaaggacttgatggatagtttccagagtcta
cgtgcgcgaatgaacgatgagtataaggaaaccgtagagcgcaggtatttcacgataaca
ggagaaaaagcggacgagcaaacgattgataacttgattgcgagcggcgagagtgaaaat
ttcatgcaaaaagcgattcaagagcaaggaagaggtcagatcatggacacgatatctgag
atccaagaaagacatgatgcagtgaaggagatcgagaagaatctactggagttgcaccaa
gttttcttggacatggcggctctggtggaagcgcaggggcaacaactgaacaacatagag
agccatgttgcaaaggcgagctcgtttgtgagaagagggactgatcagctccaagacgcg
agagagtaccaaaagagctcgaggaaatggacttgttacgccatcattctcttcatcgtt
gtctttatccttcttctcattcccgctatgccacatattatgctcatgctgaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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