KEGG   Raphanus sativus (radish): 108813148
Entry
108813148         CDS       T06014                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
  KO
K12897  transformer-2 protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108813148
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108813148
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsz03041]
    108813148
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108813148
Spliceosome [BR:rsz03041]
 Common components
  Common spliceosomal components
   SR proteins
    108813148
SSDB
Motif
Pfam: RRM_1 CoV_nucleocap RRM_5
Other DBs
NCBI-GeneID: 108813148
NCBI-ProteinID: XP_018441115
UniProt: A0A6J0JZE2
Position
6:25758470..25760736
AA seq 231 aa
MADSPRMRDSQSPSPLRELSRSRSRSRSRSRSRSRSRSRSWSVPRHRSRSRSRGRSRDRG
RTETENPGNTLYVTGLSTRVTERELETHFSKEGKVASCFLVVEPRTRASRGFAFVTMDSY
EDADRCIKYLNQSVMEGRYITVERSRRKRPRTPTPGHYLGLKNDRDYGGRDRDRGRHYGR
DDYGERRSARRSPLRGRRDYSPPPRRERSRRDRSYSPYGSPERRRHHRGSG
NT seq 696 nt   +upstreamnt  +downstreamnt
atggcggattctccgagaatgagagattcacaatctccttcacccctgagggaactttcc
aggtctcggtccagatcaagatctaggtctaggtctaggtctaggtctaggtcaaggtct
tggtctgtcccaaggcatagatcaagatcaagaagccgcggaaggtcgagggaccgtgga
aggactgaaactgaaaaccctgggaatactctctatgtgacgggcttatctacaagggtc
acagagagggagcttgaaacccatttctccaaggagggaaaggttgcctcgtgctttctc
gtggtggagccccgcactcgtgcgtctcgtggttttgcctttgttacgatggatagctat
gaagatgctgaccgctgcattaaatacctgaaccagtctgttatggagggccgttacatt
actgttgaaaggtcaaggaggaagcgtccaagaactcccactccaggacactatcttggt
ctgaagaacgacagggattatgggggtcgtgaccgagaccgtggtagacactatgggcgt
gatgattatggagagcgtaggtcagcaagacgatcacctttgagaggaaggcgtgactat
tcacctccacctcgtagggaaaggtcgaggagagatcggtcttactctccttatgggagt
ccagaaaggaggagacaccaccgtggttcagggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system