KEGG T06014: 108857706

Raphanus sativus (radish): 108857706

Entry

108857706         CDS       T06014

Name

(RefSeq) D-3-phosphoglycerate dehydrogenase 3, chloroplastic

K00058

D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]

Organism

rsz Raphanus sativus (radish)

Pathway

rsz00260

Glycine, serine and threonine metabolism

rsz00270

Cysteine and methionine metabolism

rsz01100

Metabolic pathways

rsz01110

Biosynthesis of secondary metabolites

rsz01200

Carbon metabolism

rsz01230

Biosynthesis of amino acids

Module

rsz_M00020

Serine biosynthesis, glycerate-3P => serine

Brite

KEGG Orthology (KO) [BR:rsz00001]
09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    108857706
   00270 Cysteine and methionine metabolism
    108857706
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108857706
Enzymes [BR:rsz01000]
1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     108857706
    1.1.1.399  2-oxoglutarate reductase
     108857706
Exosome [BR:rsz04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108857706

SSDB

Motif

Pfam:

2-Hacid_dh_C 2-Hacid_dh PGDH_inter ACT IlvN AdoHcyase_NAD XdhC_C NAD_binding_2 F420_oxidored TrkA_N UDPG_MGDP_dh_C

Other DBs

NCBI-GeneID:

108857706

NCBI-ProteinID:

XP_018487218

UniProt:

A0A6J0NU12

Position

5:complement(35843354..35845798)

AA seq 585 aa
MATPLGLSSLFSSRLSTTPSLFPINRKEFNRRRIILVTAGGGKPTILVAEKLGQAGIDLL
KKHANVDCSYDLSVEELCTKISLCDALIVRSGTKVGRDVFESSRGRLKVVGRAGVGIDNV
DLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNVAQADASIKAGKWMRSKYVGVSL
VGKTLAVLGFGKVGSEVARRARGLGMHVITHDPYAPADRARAIGVELVSFEVAISTADFI
SLHLPLTAATSKMLNDETFARMKRGVRIVNVARGGVIDEEALLRALDSGIVAQAALDVFT
VEPPVKDNKLVLHESVTATPHLGASTMEAQEGVAVEIAEAVVGALRGELAATAVNAPMVP
PEVLRELKPYVVLAEKLGRLAVQLVTGGSGVDAVKVTYASSRCPDDLDTRLLRAMVIKGL
IEPISSVFINLVNSDYVAKQRGVKISEERMVLDGSPGDPIEYITVRIANVESRFASALSE
SGEIKVEGRVKQGVPCLTKVGLFGVDVSLEGSVILCRQVDQPGMIGRVGSILGDENVNVS
FMSVGRIAPGKQAVMAIGVDEQPSKETLKKIGDISSIEEFVFLKL

NT seq 1758 nt +upstreamnt +downstreamnt
atggcgacacctcttggtctatcatccctcttctcctcgaggctgtccacaactccctct
ctcttccccatcaaccgtaaagaattcaaccggcgtcgtatcatcctcgtcactgccgga
ggaggaaaaccgacgatcctcgtggcggagaagctcggccaggcggggatagacctgctg
aagaagcacgccaacgtggactgctcttacgatctgagcgtcgaggagctctgcacgaag
atctcgctgtgcgatgccttgatcgtgaggagcggcaccaaggtcgggagagacgtgttc
gagtcgtctcgcgggaggcttaaggttgttggacgcgctggcgttggcatcgataacgtt
gatttggccgcggcgactgagtacgggtgtttggttgtgaatgctcccactgctaacacg
gttgctgctgctgagcatgggatcgcgcttttaaccgccatggctagaaatgtagctcaa
gccgatgcttctatcaaagctgggaagtggatgagaagcaaatatgttggtgtttcactt
gtggggaagactctagcagttcttggattcggtaaagttggatcagaggttgctaggcga
gccagagggctcgggatgcatgtcatcacacacgatccttacgcaccagctgatcgtgca
cgagccattggtgttgagctagttagctttgaagtagctatttcgactgcagacttcatc
tccttgcatcttcccctcaccgctgctacgtccaagatgctgaatgacgagacctttgcg
aggatgaagagaggagtccgtatcgtcaacgttgctcgtggtggagttattgacgaggaa
gctctcttgagggcgctcgactctggtatcgtcgctcaggcggctcttgatgttttcacc
gtggagccgcctgttaaagacaacaagttggtgttgcatgagagtgtaaccgccacgcct
catcttggtgccagtactatggaggctcaggaaggggtggcggtggaaatcgctgaagct
gttgttggagctttgagaggagaacttgctgccactgcggtcaatgcaccgatggttcca
ccagaggtgttgagggagctgaaaccgtatgttgtgctagctgaaaagcttgggagattg
gctgtacaacttgtaaccggtggaagcggtgtggacgcagtgaaagtgacttacgcttct
tcaagatgtcctgatgatctagacacgagacttctccgtgccatggtcataaagggactc
attgaacccatttccagcgtgttcataaacctggtgaactcggactacgttgctaagcaa
cgaggagtcaaaatctcagaggaacgtatggttctagacggctcaccaggggatccaata
gaatacataactgtccggatagcaaacgtggaatcaagatttgcaagcgcgttatctgag
tcaggagagatcaaagtagaaggcagagtaaaacaaggagttccatgtctaaccaaagta
gggttgtttggagttgacgtgagtttagaagggagtgtgatactgtgcaggcaagttgat
cagcctgggatgattggtagagttggtagcatcttaggagatgaaaacgtgaatgtgagt
ttcatgagcgttggaaggatagctccggggaagcaagcggtgatggctattggtgtagat
gaacaacctagcaaagaaactttgaagaagatcggagacatttcttccattgaagagttt
gtttttctgaaactatag

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