KEGG   Ramlibacter tataouinensis: Rta_38200
Entry
Rta_38200         CDS       T01544                                 
Symbol
trmE
Name
(GenBank) candidate tRNA modification GTPase
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
rta  Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:rta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rta03016]
    Rta_38200 (trmE)
Transfer RNA biogenesis [BR:rta03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Rta_38200 (trmE)
 Prokaryotic type
   Methyltransferases
    Rta_38200 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N Arf RsgA_GTPase NOG1 DUF883 ABC_tran ABC_ATPase AAA_29 Zeta_toxin AAA_25
Other DBs
NCBI-ProteinID: AEG94936
UniProt: F5Y356
Position
complement(4066126..4067445)
AA seq 439 aa
MRVSGQSVQPVIAALCGRALKPREATYLAFRAADGTPIDHGLAIHFPAPHSYTGEDVLEL
QAHGGPVVLQLLLARCLEAGQAMGLRVAEPGEFTQRAFLNDKIDLAQAEAIADLIDASTE
AAARSASRSLAGEFSREVHQLRDALVQLRMLVEATLDFPEEEIDFLKQSDAQGQLDRLRD
RLDQVLARTRQGALLREGIQVVIAGQPNAGKSSLLNALAGAELAIVTPIPGTTRDVVSQT
LQIEGVPVHVVDTAGIRPQGEGADPVERIGIERAWGRIAQADAVVFLHDLTRTALADYRA
ADEAIAHSLREKLPQAVPVIDVWNKADAAVPPSPPATSLTLSAKTGAGLDLLRRRLLEVA
GWQSAPEGLFIARQRHVQALRQVGQHLALAEAHLAPQALALELLAEELRLAQSALAAITG
EFTADDLLGVIFSSFCIGK
NT seq 1320 nt   +upstreamnt  +downstreamnt
gtgcgcgtgtcgggccaaagcgtgcagccggtcatcgccgcgctgtgcggccgggcgctg
aaaccgcgcgaggcgacctacctggcgttccgcgccgccgacggcacgcccatcgaccac
ggcctggccatccacttcccggcgccgcattcctacaccggcgaggacgtgctggagctg
caggcgcacggcgggccggtggtgctgcagctgctgctggcgcgctgcctggaggccggc
caggccatgggcctgcgcgtggccgagcccggcgagttcacccagcgcgccttcctcaac
gacaagatcgacctggcccaggccgaggccatcgccgacctgatcgacgccagcaccgag
gccgcggcgcgcagcgccagccgctcgctggccggcgagttctcgcgcgaggtgcaccag
ctgcgcgacgcgctggtccagctgcgcatgctggtggaggcgacgctggacttccccgag
gaggagatcgacttcctgaagcagtccgacgcccagggccagctggaccggctgcgggac
cggctggaccaggtgctggcgcgcacccgccagggcgcgctgctgcgcgagggcatccag
gtggtgatcgccggccagcccaacgccggcaagagctcgctgctcaacgccctggccggc
gccgagctggccatcgtcacgcccattcccggcaccacgcgtgacgtggtcagccagacc
ctccagatcgagggcgtgccggtgcacgtggtggataccgccggcatccgcccccagggc
gaaggcgccgacccggtggagcggatcggcatcgaacgggcctggggccgcatcgcgcag
gccgacgcggtggtgttcctgcacgacctgacgcggacggccctcgccgactaccgggcc
gccgacgaggcgatcgcgcacagcctgcgcgagaagctgccgcaggcggtgccggtgatc
gacgtctggaacaaggccgacgcggcggttcctccctccccccccgccacctcactcacc
ctctccgccaagaccggcgccggcctggacctcctgcgccggcgcctgctcgaggtggcc
ggctggcaatccgcccccgaaggcctgttcatcgcccgccagcgccacgtccaggccctg
cgccaggtcgggcagcacctggcgctggccgaggcgcatctggcgccgcaggccctggcc
ctggagctgctggccgaggagctgcgcctggcgcagagcgcgctggcggccatcaccggc
gaattcaccgcggacgacctgctgggcgtcatcttctccagcttctgcatcggcaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (35)   

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