KEGG   Rathayibacter tanaceti: GSU10_01975
Entry
GSU10_01975       CDS       T06377                                 
Name
(GenBank) ATP-binding cassette domain-containing protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rte  Rathayibacter tanaceti
Pathway
rte02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rte00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GSU10_01975
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rte02000]
    GSU10_01975
Transporters [BR:rte02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    GSU10_01975
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_16 AAA_22 SMC_N AAA_29 oligo_HPY nSTAND3 DUF87 Sigma54_activat Sigma54_activ_2 nSTAND1 AAA_33 AAA_5 RsgA_GTPase FtsK_SpoIIIE Zeta_toxin AAA_18 PRK CoaE
Other DBs
NCBI-ProteinID: QHC54545
Position
422406..423962
AA seq 518 aa
MSALVVDGLRVAFDGVEVVHGISFRVEPGECVAIVGESGSGKSVTARALLGLSGGAVTGS
VRVGGAEVVGAGERILRRLRGGSVGFVPQDALLSLDPLRPIGREIGDAFRLHGRLPAAER
ARRTVEVLASVGMPEPAERRRERSGDLSGGLRQRALLAAAVALDPPLVVADEPTTALDVT
VQARVLELFAEQKARGRALVLVSHDLAVVAGLADRILVLAEGRVVEEGPASAVLGAPRSA
QARALVAAVPSGRPRGSRLTDPSAPVLPPDPPGEVVLRARELSARFPLPGGGVRIAVDGV
DLELRQGETVGLVGESGSGKSTVARLLLALRRPQEGSVELFGEPWSAATERARRPRRPRI
GAVYQDSLSSFDPRWSVGRLLRDAGASSVPALLESVGLDPSVERRSPRTLSGGQRQRVSI
ARALATRPDVLICDEPVSALDVSVQAQILDLLDDLQRRHGLALLLISHDLGVIAHMSDRI
AVMRGGTVVEAGPAASLLAAPQEEYTRQLLAAAPRLDR
NT seq 1557 nt   +upstreamnt  +downstreamnt
gtgagcgcgctggtcgtcgatggcctgcgggtcgcgttcgacggggtcgaggtcgtgcac
gggatctcgttccgggtcgagccgggggagtgcgtcgcgatcgtcggcgagtccgggtcg
ggcaagagcgtcaccgcgcgggccctgctggggttgagcggaggcgcggtgaccggcagc
gtccgtgtcggcggtgcggaggtggtcggcgccggcgagcgcatcctgcggaggctgcgc
ggtggatccgtgggcttcgtcccgcaggatgcgctgctctcgctcgacccgctgcgcccg
atcggccgcgagatcggcgatgcgttccgcctgcacggacggctgcccgcggccgagcgc
gcgcggcgcacggtcgaggtcctggcgagcgtcggcatgcccgagccggccgagcggagg
cgcgagcgctccggcgacctctccggcgggctccgccagcgcgccctcctcgccgctgcc
gtggctctcgatccgccgctggtcgtcgccgacgagccgaccaccgcgctcgacgtcacc
gtgcaggcccgcgtgctcgagctcttcgccgagcagaaggcccgcggccgggcgctcgtg
ctggtctcgcacgacctcgccgtggtcgcggggctcgccgaccgcatcctcgtgctcgcc
gagggccgggtcgtggaggaggggcccgcgtccgcggtgctcggcgcgccccgcagcgcg
caggccagggcgctcgtcgccgctgttccgtccgggcgtccgcgcggctcgcggctgacc
gacccgtcggcgcccgtcctcccgcctgaccctcccggcgaggtcgtgctgcgcgcccgt
gagctctccgcccggttcccgctgccgggcggaggcgtgcggatcgcggtcgacggcgtc
gacctggagctgcgccagggcgagaccgtgggcctggtcggcgagtccggctccggcaag
agcacggtcgcgcgcctgctgctggcgctgcggcgtccgcaggagggatccgtcgagctg
ttcggcgagccgtggtcggcggcgacggagcgcgcccgccgtccccgccgcccgcggatc
ggcgccgtctaccaggacagcctctcctcgttcgacccgcgctggagcgtcggccggctc
ctccgcgacgccggcgcctcctccgtgcccgcgctgctcgagagcgtggggctcgacccc
tcggtggagcggcgctcgccgcggaccctctcgggcgggcagcgtcagcgcgtctcgatc
gcccgggcgctcgcgacccgccccgacgtgctgatctgcgacgagcccgtctcggccctc
gacgtctcggtgcaggcgcagatcctcgacctgctcgacgatctgcagcgccgccacgga
ctcgcgctgctgctcatctcgcacgacctcggcgtgatcgcgcacatgagcgaccgcatc
gccgtgatgcgcgggggcacggtcgtcgaggccgggccggccgcatcgctcctcgccgcg
ccgcaggaggagtacacgcggcagctgctggcggcggcgccgcggctcgaccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

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