KEGG T06377: GSU10

Rathayibacter tanaceti: GSU10_02580

Entry

GSU10_02580       CDS       T06377

Name

(GenBank) 3-methyladenine DNA glycosylase 2

K13529

AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

rte Rathayibacter tanaceti

Pathway

rte03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:rte00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GSU10_02580
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rte03000]
    GSU10_02580
   03400 DNA repair and recombination proteins [BR:rte03400]
    GSU10_02580
Enzymes [BR:rte01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     GSU10_02580
Transcription factors [BR:rte03000]
Prokaryotic type
  Helix-turn-helix
   AraC family
    GSU10_02580
DNA repair and recombination proteins [BR:rte03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GSU10_02580

SSDB

Motif

Pfam:

HhH-GPD AlkA_N RecR_HhH OGG_N HHH

Other DBs

NCBI-ProteinID:

QHC54646

Position

550448..551233

AA seq 261 aa
MRNHALPGVERVGDDGRSLERLLTVAGALHPVALAITETGVRFEAETVVIEPAAAIVRAW
FDLDSDVVAIGRQLSRDPLLARSVAERPGLRATQYPEAFEAAVMAVLGQQVSVAAARTFG
ARTVAAFGTRGARGLLAFPTPAALLAPELEELRSAIGVTSARARTVRALARAVADGLVLD
GAGDLREQRRLLLALPGIGPWTADYLALRLLGDPDAFPAGDLVLRRALGRVSTAEAEAAS
QAWRPHRAHAAFHLWASTGAV

NT seq 786 nt +upstreamnt +downstreamnt
gtgcgcaaccacgccctccccggagtggagcgtgtcggtgacgacggccggagcctggag
cgcctgctcacggtcgcgggtgccctgcacccagtggcgctcgccatcaccgagacgggc
gtccggttcgaggcggagaccgtcgtgatcgagcccgcggcggcgatcgtccgcgcctgg
ttcgacctcgactctgacgtggtcgcgatcggccggcagctctcgcgcgacccgctgctc
gcgcgctcggtcgccgagcggcccgggctccgtgcgacgcagtacccggaggcgttcgaa
gccgccgtgatggcggtcctcgggcagcaggtctccgtcgctgcggcacgcaccttcggt
gctcggacggttgccgcgttcggcacccgcggcgcgcgcggactgctggccttcccgact
cctgcggccctgctcgcgccggaactcgaggagctgcgctcggccatcggcgtcaccagc
gcccgagctcggacggtgcgtgccctcgcccgtgccgtcgccgacgggctcgtgctcgac
ggcgcaggcgatctgcgcgagcagcggcgcctcctcctcgccctccccgggatcggaccg
tggacggccgactacctcgccctgcggctgctcggcgatccggacgccttcccggccggc
gacctggtgctgcgcagggcgctcggccgtgtgagcaccgcggaggcggaggcagcctcg
caggcctggcgtccgcaccgggcgcatgcggcgttccacctctgggcgagcaccggagcg
gtctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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