KEGG   Rhincodon typus (whale shark): 109910416
Entry
109910416         CDS       T06055                                 
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
  KO
K15516  fragile X mental retardation protein
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109910416 (fmr1)
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109910416 (fmr1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     109910416 (fmr1)
   mRNA cycle factors
    Stress granule specific factors
     109910416 (fmr1)
SSDB
Motif
Pfam: FXMRP1_C_core KH_9 Tudor_FRX1 KH_1 Agenet FXMR_C2 KH_2 dUTPase
Other DBs
NCBI-GeneID: 109910416
NCBI-ProteinID: XP_020365189
Position
14:8132183..8195438
AA seq 525 aa
MEDLMVEVRGSNGAFYKAFVKDVHDEALTVAFENNWQPERQIPFHDVRFPPPADYHKDIN
EGDDVEVYSRANEKEPCGWWLAKVRMMKGEFYVIEYAVCDATFNEIVTVERLRPINPNKP
ATKSTFHKVKLDVPDDLRRVCANESAHKDFKKAVGAYCVYFDSESNQLIVLSTNEMTAKR
ASMLSDMHFRSIRTKLTLMLRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIELDEETCTFHIYGEDQEAVKQARNYLEFTEDSVQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEGDGDKKIPREEGMVPFVFVGTKESISNARVLLDYHLNYLKE
VDQLRMERLQIDEQLRQMGAGLRTPANRPDKERGYSTDESTSYLRGGRPYSSRGRGRRGP
GYASGNNSEASNASETESEHRDELSDWSLAPTDEEREPYSRRGDSRRRGSAGRGRGGGRG
RGSNKNPSATSDEFLRADIRKRNSSRDSKTRTTDGSLQVAFRLWF
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggaggatttaatggtggaggtgcgcggctctaatggagccttttataaggcatttgtg
aaggatgtgcatgatgaggctttaactgttgcttttgagaacaactggcaacctgagcgg
cagattcctttccatgatgttcgatttccaccaccagcagactatcacaaagacattaac
gaaggtgatgatgttgaggtgtattctcgagcaaatgaaaaagaaccttgtggctggtgg
ttggcaaaagttagaatgatgaagggtgaattttatgttatagaatacgccgtctgtgat
gccactttcaatgaaatagttacagtggaacggttacgacctattaaccctaataaacct
gcaacaaaaagcacattccacaaagtaaaacttgatgttccagatgacctgaggcgtgta
tgtgccaacgaatctgcacataaggattttaaaaaggctgttggcgcttattgtgtgtac
tttgattcagaaagtaatcaactaattgttttgtcgaccaacgaaatgacagcaaagcga
gcaagcatgttgagtgacatgcatttcagaagcatccggacaaagttgactctgatgttg
aggaatgaggaagccagcaagcagctggagagctctcgacagcttgcgtcacgcttccat
gagcagtttgttgtacgagaagatctcatgggtcttgccatcggtacacatggagccaac
atccagcaagctaggaaagtgccaggcgtcactgcaatcgaactggatgaagagacttgc
actttccacatctacggtgaggaccaggaggcagtcaagcaagccagaaattatctcgag
tttacagaagactctgtacaagtaccgaggaatctagtaggaaaagtaataggcaaaaac
ggaaagctcatacaagaaattgtagacaaatcaggagttgtccgtgtgagaatcgaagga
gatggtgacaaaaagattccacgcgaagagggcatggttccatttgtgtttgttggaaca
aaggagagcataagcaatgcacgtgttctattggactaccatctgaactatttaaaggag
gttgaccagctacgcatggaacgcttacaaattgatgagcaacttcggcagatgggtgcg
ggattgaggacccctgcaaaccgtcccgacaaagaaaggggctactcgaccgatgaaagt
acaagttacttgcgtgggggcagaccttacagtagtcgagggcgtggcagacgaggccca
ggctatgcatcaggtaataactctgaggcatccaatgcctccgagactgaatctgagcac
agagatgagctgagtgattggtcactggcgccaacagatgaagaaagggaaccatattca
cgccggggtgacagtcgcaggagagggagtgctggccgtggccgtggtggaggtcgtggc
cgtgggagcaacaaaaatccgtcagcaacttcagatgaattcttgagggcagacatccgt
aaacgcaactcatcaagagattcaaaaaccaggacgacagatggctcattgcaggtagct
tttcgattgtggttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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