KEGG   Staphylococcus aureus subsp. aureus ED98: SAAV_0422
Entry
SAAV_0422         CDS       T01124                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sad  Staphylococcus aureus subsp. aureus ED98
Pathway
sad03030  DNA replication
sad03430  Mismatch repair
sad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAAV_0422 (dnaX)
   03430 Mismatch repair
    SAAV_0422 (dnaX)
   03440 Homologous recombination
    SAAV_0422 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sad03032]
    SAAV_0422 (dnaX)
   03400 DNA repair and recombination proteins [BR:sad03400]
    SAAV_0422 (dnaX)
Enzymes [BR:sad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAAV_0422 (dnaX)
DNA replication proteins [BR:sad03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAAV_0422 (dnaX)
DNA repair and recombination proteins [BR:sad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAAV_0422 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_22 DNA_pol3_gamma3 AAA_30 AAA_19 AAA_5 TIP49 AAA_14 AAA_16 PIF1 Mg_chelatase AAA_assoc_2 nSTAND3 TniB AAA_24 AAA_7 AAA_18 ResIII T2SSE AAA_2 TsaE RNA_helicase
Other DBs
NCBI-ProteinID: ACY10360
Position
463715..465412
AA seq 565 aa
MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFSGPRGTGKTSIAKMFAK
AINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY
KVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTEPHKIPPTIISRAQRFDFKAISL
DQIVERLKFVADAQQIECEDEALAFIAKASEGGMRDALSIMDQAIAFGDGTLTLQDALNV
TGSVHDEALDHLFDDIVQGDVQASFKKYHQFITEGKEVNRLINDMIYFVRDTIMNKTSEK
DTEYRALMNLELDMLYQMIDLINDTLVSIRFSVNQNVHFEVLLVKLAEQIKGQPQVIANV
AEPAQIASSPNTDVLLQRMEQLEQELKTLKAQGVSVAPAQKSSKKPARGIQKSKNAFSMQ
QIAKVLDKANKADIKLLKDHWQEVIDHAKNNDKKSLVSLLQNSEPVAASEDHVLVKFEEE
IHCEIVNKDDEKRSSIESVVCNIVNKNVKVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQ
AQQTDIAQKAKDLFGEETVHVIDEE
NT seq 1698 nt   +upstreamnt  +downstreamnt
ttgaattatcaagccttatatcgtatgtacagaccccaaagtttcgaggatgtcgtcgga
caagaacatgtcacgaagacattgcgcaatgcgatttcgaaagaaaaacagtcgcatgct
tatatttttagtggtccgagaggtacggggaaaacgagtattgccaaaatgtttgctaaa
gcaatcaactgtctaaatagcactgatggagaaccttgtaatgaatgtcatatttgtaaa
ggcattacgcaggggactaattcagatgtgatagaaattgatgctgctagtaataatggc
gttgatgaaataagaaatattagagacaaagttaaatatgcaccaagtgaatcgaaatat
aaagtttatattatagatgaggtgcacatgctaacaacaggtgcttttaatgccctttta
aagacgttagaagaacctccagcacacgctatttttatattggcaacgacagaaccacat
aaaatccctccaacaatcatttctagggcacaacgttttgattttaaagcaattagccta
gatcaaattgttgaacgtttaaaatttgtagcagatgcacaacaaattgaatgtgaagat
gaagccttggcatttatcgctaaagcgtctgaagggggtatgcgtgatgcattaagtatt
atggatcaggctattgcatttggtgatggtacgttaacattgcaagatgcgttgaatgtc
acaggtagcgtacatgatgaagcgttggatcacttgtttgatgatattgtacaaggtgac
gtacaagcatcttttaaaaaataccatcagtttataacagagggtaaagaagtgaatcgc
ctaataaatgatatgatttattttgtcagagatacgattatgaataaaacatctgagaaa
gatactgagtatcgagcactgatgaacttagaattagatatgttatatcaaatgattgat
cttattaatgatacattagtgtcgattcgttttagtgtgaatcaaaacgttcattttgaa
gtgttgttagtaaaattagctgagcagattaagggtcaaccacaagtgattgcgaatgta
gctgaaccagcacaaattgcttcatcgccaaacacagatgtattgttgcaacgtatggaa
cagttagagcaagaattaaaaacactaaaagcacaaggagtgagtgtcgctcctgctcaa
aaatcttcgaaaaagcctgcgagaggcatacaaaaatctaaaaatgcattttcaatgcaa
caaattgcaaaagtgctagataaagcgaataaggcagatatcaaattgttgaaagatcat
tggcaagaagtgattgatcatgccaaaaacaatgataaaaaatcactcgttagtttattg
caaaattcggaacctgtggcggcaagtgaagatcacgtacttgtgaaatttgaggaagag
atccattgtgaaatcgtcaataaagacgacgagaaacgtagtagtatagaaagtgttgta
tgtaatatcgttaataaaaacgttaaagttgttggtgtaccatcagatcaatggcaaaga
gttcgaacggagtatttacaaaatcgtaaaaacgaaggcgatgatatgccaaagcaacaa
gcacaacaaacagatattgctcaaaaagcaaaagatcttttcggtgaagaaactgtacat
gtgatagatgaagagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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