KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111952450
Entry
111952450         CDS       T05762                                 
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
  KO
K23195  transcriptional repressor CTCF
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:salp03000]
    111952450 (ctcf)
   03036 Chromosome and associated proteins [BR:salp03036]
    111952450 (ctcf)
Transcription factors [BR:salp03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    111952450 (ctcf)
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    111952450 (ctcf)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_jaz zf-met zf-C2HE zf-C2H2_6
Other DBs
NCBI-GeneID: 111952450
NCBI-ProteinID: XP_023826891
Position
LG26:complement(21144664..21151794)
AA seq 798 aa
MKYSFLVQVLPMDGGPTDVVVEAKDSITYEGEEVVADLLQQAAEGVMDQQPVGEGGLDPQ
ELVDGVNVEMMVMDSLDPALLQMKTEVMDAPVVTAHEATVTTVDETQIITLQVVNLEEQQ
LGGLGELQLVQVPVSAVPVTQATVEELQGTFVDATAMPKDGNPMICHTLPLPEGFQVVKV
GANGEVETVEQDELQHQEEQQVQPEEEEEGLHCEPQPEDPQWTTDPDYQPPAKKTAKKAK
KSKLRYNTEGDKDNMEVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTF
QCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQD
CDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSY
ASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI
ARKSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQ
ERHMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKTFTR
RNTMARHAENCNGDPTEGENGTPPKRGRGGRKRKMRSRKDDDDDSEDNADPELDDIDEED
EDAEEALLEEEEEEEMELEQAPPTKPIPAPVEPPVKRKRGRPPKNAPKPASPAKASKAAP
KGKAAAAAAIIQVEDENTGVIENIIVKNEPEAEQAAIEVVVEQSEEAGAGVETVELPVAE
AAPNGDLTPEMILSMMDR
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaagtattcctttctggtgcaggtattaccgatggacggcggaccaaccgacgttgtg
gttgaggccaaggacagcatcacctatgagggggaggaggtggtggcagacctgctccag
caagcagcagagggggtaatggaccagcagcccgtgggagaggggggcctggatccccag
gagctggtggatggagtcaatgtggagatgatggtaatggattccctggacccggccctg
ctgcagatgaagactgaggtgatggacgcccctgtggtcacagcccacgaggccacagtc
accacagtggatgagacccagatcatcactctgcaggttgtcaatttggaggagcagcag
cttggaggccttggggagctacagctggtccaggtgcctgtctcggctgtgcctgtaacg
caggccactgtagaggagctacagggcaccttcgtggacgccacggccatgcccaaagat
ggaaaccctatgatctgccacaccctgcccctgccagagggcttccaggtggtgaaggtg
ggtgcgaatggtgaggtggagacagtggagcaggatgagctccagcaccaggaggagcag
caggtccagcctgaggaggaggaagaggggctgcactgcgagccccagcctgaagaccca
cagtggaccacagacccagactaccaacccccggccaagaagactgccaagaaagcaaag
aagagcaagctgcgctacaacactgagggggacaaagacaacatggargtgtctgtctat
gactttgaggaggagcagcaggaggggatgctctctgaggtcaatgcagagaaagtggtg
ggcaacatgaagccccccaaacccaccaagatcaagaagaagggtgtgaagaaaacattc
cagtgtgagctgtgtagctacacctgtccccgccgctccaacctggaccgacacatgaag
agccacacggacgagaggccccacaagtgccatctgtgtggaagggccttcaggaccgtt
accctgctgaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagat
tgtgacatggcctttgtgaccagcggagagctggtccgacatcgtcgctacaagcacact
catgagaaacccttcaagtgctccatgtgtgactatgccagtgtggaggtgagcaagcta
aagcggcacatccgttcccacactggggagcgtccgttccagtgcagcctgtgcagctac
gccagcagagacacctacaagctgaagagacacatgaggacacactcaggagagaagccg
tatgaatgctacatctgccacgcccgtttcacccagagtggaaccatgaagatgcacatc
ctgcagaagcacacagagaacgtggccaagttccactgcccccactgtgacacagtcatc
gcccgcaagagtgacctgggcgtccatctgcgtaagcagcactcgttcattgagcaggga
cggaaatgccgttactgtgatgcggtgttccacgagcgctatgctctcatccagcaccag
aagtcccacaagaatgagaaacgcttcaagtgtgaccagtgtgactactgctgcagacaa
gagcgtcacatgctgatgcacaggcgcacacacacaggagagaagccgtacgcctgtagc
cagtgtgaaaagaccttccgccagaagcagctcctggacatgcacttccggcgctaccac
gaccccaactttgtgcctactgcctttgtgtgcaccaagtgtggcaagaccttcacccgc
aggaacaccatggccagacatgcagagaactgtaacggggatcctactgaaggagagaac
ggaaccccacccaagagaggacggggtgggaggaagaggaagatgcgctcaaggaaggac
gatgatgacgatagtgaggacaatgctgatcctgagctggatgacattgatgaagaggat
gaggatgccgaagaggcactgctggaggaggaggaggaggaggagatggagttggagcag
gctccacccaccaagcctatccccgcccctgtggagccgcccgtcaagaggaaacgtggt
agaccccccaagaatgcacccaaacctgcctcacctgccaaagctagcaaggctgcccct
aagggcaaagctgctgcagcagcagccatcatccaggtggaggatgagaatacaggtgtc
atagagaacatcatagtgaagaatgagccagaggctgagcaggctgccatagaggtggtg
gtggagcagtcggaggaggcaggagcaggggtggagacagtggagctgcctgtagcagag
gctgcccccaacggagatctcacccctgagatgatcctcagcatgatggaccggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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