KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111969689
Entry
111969689         CDS       T05762                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013  Nucleocytoplasmic transport
salp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111969689
   03015 mRNA surveillance pathway
    111969689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salp03019]
    111969689
Enzymes [BR:salp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111969689
Messenger RNA biogenesis [BR:salp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111969689
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 111969689
NCBI-ProteinID: XP_023851641
Position
LG11:complement(5596528..5612215)
AA seq 488 aa
MATDSWAQAVDEQEAATESIGSLQIKDKHEENGTTTTAAASASTPAKMEGGEGNKTEEED
DKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYTMG
FNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKFPQCLCVSPT
YELALQTGKVIEQMGKYYSEVKLVYAIRGNKLQKGTQLQEQVVIGTPGTMLDWCLKFKFI
DPKKIKVFVLDEADVLIATQGHQDQSIRFHRMLPKQCQILLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIEQYYVLCNSKEEKFVALCNIYGAITIAQAMIFCHTRKMAGWLAG
ELSREGHQVALLSGEMQVEQRAAVINRFREGKEKVLVTTNVCARGIDVEQVFVVINFDLP
VDRDGNPDNETYLHRIGRTGHFGKRGLAINMVDSKFSMNVLNKIQDHFNKKIEKLDTDDL
DEIEKIAN
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcaacggactcctgggcccaggctgtggacgaacaagaagccgcgacggaatcgatt
ggtagcctgcaaatcaaagacaagcatgaggaaaatggcacgacaacaaccgcagcagca
agtgcttcaacgcctgcaaagatggaaggaggcgagggaaacaaaacagaggaggaagac
gataaagatgacaaggcggcacagtcgttgttgaataagttgatacgcagtaatctagtg
aacacaaccaatcaagtagaggtccttcagcgggatcctaactctccactctactccgta
aaatcatttgaggagctgcggcttaaacctcagctgcttcagggagtatacaccatgggc
ttcaaccgcccctccaaaatccaagagaacgctttacccttgatgctcgcagaaccccca
cagaacctgatagcccagtctcagtcggggacggggaagacggctgctttcgtcctggcc
atgctcagtcacgtcgaccccaacaacaagtttcctcagtgtctgtgtgtgtctcccact
tatgagctggccctacagacagggaaggtcattgagcagatggggaagtactactcagag
gtcaaactagtctacgccatcagaggaaacaaactgcaaaaaggcacgcagctccaggag
caggtagtgattgggacgccaggcaccatgctggactggtgtctgaagtttaaattcatc
gaccccaagaagattaaagtgtttgtcctggatgaggctgatgtcctgattgctacacag
ggacaccaagaccagagcattcgctttcataggatgctacccaaacagtgtcagatactc
ttgttctctgccacgtttgaggagactgtgtggaactttgcccagcgcatcgtcccagac
cccaacatcatcaagctgaagagggaagaggagacgctggacaccatcgagcagtactac
gtcctctgtaacagcaaagaggagaagttcgtggccctctgcaacatctacggggccatc
accatcgctcaggccatgatcttctgtcatacaaggaagatggcgggctggctggcaggt
gagctgtcccgggagggccaccaggtggcgctgctcagtggggagatgcaggtggagcag
agagctgctgtcatcaaccgcttcagagaaggaaaggagaaggtcctggtcaccaccaac
gtctgcgccagaggtatcgacgtggagcaggttttcgtggtgattaactttgacctgccg
gtggacagagacggtaacccagacaatgagacgtacctgcaccggattggccgcacaggt
cattttgggaagaggggattggccatcaacatggtggacagcaagttcagcatgaatgtc
ctcaacaagatccaggatcacttcaataagaaaattgagaagctggacacagatgatctg
gatgagattgagaaaattgctaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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