KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111974985
Entry
111974985         CDS       T05762                                 
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010  MAPK signaling pathway
salp04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111974985
   04020 Calcium signaling pathway
    111974985
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:salp04040]
    111974985
Ion channels [BR:salp04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   111974985
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 111974985
NCBI-ProteinID: XP_023858876
Position
LG15:complement(15449063..15618519)
AA seq 2381 aa
MARFEEELSNRRGGVCQAGPPRVAGRPAGPPSGPRVYKQSMAQRARTMAIYNPIPVKQSC
LTVNRSLFIFSEDCIIRKYAQKITECPFEYLILATIIANCIVLALEQHLPASDKTPMSER
LDDTEPYFIAIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDLR
TLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGKF
HRTCFRTDTGEQAAEFPCGLEAPARTCENGTVCQEYWIGPNYGITNFDNILFAILTVFQC
ITMEGWVDILYNANDASGNTWNWIYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQ
EFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKHNNPVLKRA
KKSKHDLINAEEGEDHFTDISSVGSPFTRAAPPGSPFTRASLMSSKNDSAYYFRRKEKRL
RFTIRRLVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLTEMSM
KMYGLGPRNYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASYGISVLRALRLLRIFKVTKY
WNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGMFNFEEETPTTNFDTFPA
AILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDN
LANAQELTKDEEEQEVAITKKMALQKVKEVKEVSPMSAANISITAFVKQSRGALSRSSSV
CSVNSLKEQQKSLKMMSVWEQRTTQLRRHNLRASSEALYSELDPEERLRMSSALHIRPDM
KTHLDRPLVVEPHDGPGPMGHLKHRTPKETDNPGDPAGPQPHRRHRDRERPIDEANENGD
PGKEGRHHVHHSHSKDPNGTRSKEGKSERSHSREGGRRHHHQTSVDEGGGGGTGTGEREH
RHHHSHRQAREGNGTVNSGRKDERRSRHKDGRSGERCSRGENGANGERRRQKTHSYRGQS
TLKGEEHSERERGKSHRDRYVESEGDSMATSTQQDPGDQRWGTEIPEDSDNQRNVRRTGR
TAIHIPPVTITSPPGETPLLPMNSIDCETMPMNEEKKTLEALTRTGPRPILPYSSMFVFG
QTNMVRRLCHYIVSLRYFEMCILVVISMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVF
TFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVIAVQLFKGKFFYCSDE
SKGLEKDCRGNFLDYDKDEVAAQPRVWKKYEFHYDNVLWAFLTLFTVSTGEGWPDVLKHS
VDATLEDQGPSPGYRIEISIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEK
NERACIDFAINAKPLTRYMPENVQSFQYRMWKFVVSPPFEYAIMIMIALNTVVLMMKFHG
APDFYEAMLKHFNIVFTALFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDIVVTE
INTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYA
IIGMQVFGNIELNEDTAITHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDERS
GNLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRV
WAEYDPAACGRIKYLDMYQILLHMSPPLGLGKKCPPRVAYKRLVKMNMPIADDNTVHFTS
TLMALIRTALEIKLASGMVAQRLSDAELKKELSQIWPSLSQKTMDLLVTPHKPNELTVGK
VYAALMIFDYYKQNRAKRLKEQQQQQQQQNATGSQGKVRALFKPMLPLTHKQEKVKEKAM
TNVEPPCELLPQPQSQALPTPSSTLLNNGGTLPGHDGTMKGSSSWVSEKSREVHRPRNKT
PVQVGQSEDVPNLTIPQESVEMRKMDTSCSTVPGPGSGLESQGRAVSMPRLNAELQRSKS
RHSPGTLLAPVPDCSPMKRSASTHAPQRPQEVNLHEYTLERPSTQERPHHHHHHHRCHHH
RERDKKQXSLDRTPSTIGAPGDPAAEPSSRDRVQDRGRSHERKNHSTAGEKQRYYSCDRY
SSREHCHTTKSATTSCATSPSEVQEPSINKQGSGSVRGSPVMLTSGAITPSRGRRQLPQT
PLTPRPGVTFKTANSSPVHFLSAQCGSGLPTLSPGRLSRGLSEHNALLHSGTYHIPSPIT
RISSEPFLGYSHNDPQCQGSPYCNLRDELLSPYAARARSPRTPRPQMRPGALHLPPPPQQ
RRAVPNGYHFTFGGNGNASLGSGSGARPPRYYREAEEDEWC
NT seq 7146 nt   +upstreamnt  +downstreamnt
atggctcgcttcgaagaggaactatctaaccggcgtggaggggtctgtcaagcgggccca
ccaagagtggcaggtaggccagcaggccccccaagcggccctagggtgtacaaacaatca
atggcccaacgagccaggacaatggccatttacaaccccatccctgtcaagcagagctgt
cttactgtcaaccggtctctattcatctttagtgaggactgtatcatacggaaatatgcc
caaaagattaccgaatgtccatttgaatacctgatcctggccaccattatagccaactgc
atcgtccttgccttggagcagcacctaccagccagcgacaagacccccatgtcagagcgc
ttggatgacacagagccctattttattgcaatattttgttttgaagctggcattaagatc
atcgcccttggttttgcgtttcacaaaggctcctatcttcggaatggctggaatgtaatg
gactttgtggtggtactaacagggatgctggctacagtgggagcagactttgacttgaga
actctgagggcagtacgggtcctgaggccactgaaactggtgtctggaatccctagtctt
caggtagttctaaagtccatcatgaaagccatggtgcctctgctgcagattggcatgctg
ctcttcttcgctatcctcatgttcgccatcatcggcctggacttttacatgggcaagttc
caccggacctgyttcaggactgatacaggtgagcaggcagcagagttcccctgtggtttg
gaggctccagcgaggacctgtgaaaatggaactgtgtgtcaggaatactggatcggcccc
aactacggcattaccaactttgacaacatcctctttgctattctgaccgtcttccagtgc
atcaccatggagggatgggtggacatcctctataacgccaacgatgcctcagggaacacc
tggaactggatctacttcatccccctcatcatcatcggatccttcttcatgctcaacctg
gtcctgggagtcctgtctggggagtttgccaaggagcgtgagcgtgtggagaagaggcag
gagtttctgaagcttcgcaggcagcagcagatcgagagggagctgactggatacctggaa
tggatatgcaaggcagaggaggtgatgctggcagaggaggacaagcatgctgaagagaag
tctcctctggatggagcgtggtacaagaggaaacacaacaacccagtgttaaaaagagcc
aagaagagcaagcatgacctgatcaacgctgaggagggcgaagaccacttcactgacatc
tcatctgttgggtctccgttcacccgggctgctcccccagggtctccgttcacccgggcc
agcctgatgagcagcaagaacgacagtgcttactacttccggaggaaagagaagcggctc
cgcttcaccatcagacgcctggtcaaggcccaaagcttctactggacagtcctgtgtctg
gtgggcctcaacacactgtgtgtggccatcgtccattatgaccagcctgagtggctcacc
tatgcgctgtatttggcagagtttgtattcctgggcttatttctgactgagatgtccatg
aaaatgtatggactaggacctaggaactacttccattcctctttcaattgttttgatttt
ggagtgattataggcagtatttttgaggtgatctgggcagttgtgaaacctggggcctcc
tacggcatcagcgtcctgcgagctctccgtctgctcaggattttcaaagtcactaagtac
tggaactctctgaggaacctggtggtctctttactgaactccatgaagtccattatcagc
ctgctcttcctcctcttcctcttcatcgtggtgttcgccctactgggcatgcagctcttt
gggggaatgtttaattttgaagaggagacaccaacaacaaacttcgacacctttccagca
gccattctcacagttttccagattctgacaggagaggactggaatgcggtgatgtatcat
gggatagagtcccaggggggcgtgcgccggggaatgttctcctccatctacttcatcgtt
ctcaccctgtttggaaactacactctgctcaatgtcttcttggccatcgctgttgacaac
cttgcaaacgcacaggagctcactaaggacgaggaggagcaggaggtggccatcactaag
aaaatggccctccagaaagtcaaggaggtgaaggaggtcagccccatgtcggcagctaac
atctccatcacagcttttgtaaagcaaagtcgaggtgcactctctcgcagctcgtccgtc
tgcagcgttaattcacttaaggagcagcagaagtctctgaagatgatgtcagtgtgggag
cagcgcaccactcagctgaggagacacaacctgcgggccagcagtgaggccctgtacagc
gagctggaccctgaggagaggctacgcatgtcctccgccctgcacatccgccctgacatg
aagacccacctggaccggcccctggttgtggagccccacgacggccccggccccatgggc
cacctcaagcaccggacccctaaggagacagataaccctggggacccggccggcccccag
ccacataggcgccaccgggacagggagagacccatygacgaggccaatgagaatggagat
ccaggcaaagagggtaggcaccatgtccatcacagtcacagcaaggaccccaacgggact
cggagtaaggaggggaagagtgagaggtcgcacagccgagagggtggcaggaggcaccac
caccagacctcagtggacgagggaggtggagggggaactgggacgggagagagagagcac
cgccaccaccactcccacagacaggccagagagggtaacggcactgtcaacagcggacgc
aaggatgagcgcaggtcacgccacaaagatggccgctcaggagagagatgctccagggga
gagaacggggccaatggggagaggaggagacagaagacccacagttacaggggccagtcc
acactgaagggagaggagcacagcgagagggagagggggaagagccacagggacagatat
gtggagtctgagggcgactccatggccactagcacccagcaggaccctggagatcagagg
tggggcacagagatacctgaggactcagacaaccagaggaacgtcagacggacaggacgg
acggccatccacatcccccctgtcaccatcacctccccgcctggggaaaccccccttctc
cccatgaacagtatagactgtgagaccatgcctatgaacgaggagaagaagaccctggag
gcgttgactcggaccggacccagacccatcctcccctacagctccatgtttgtgtttggc
cagaccaacatggtgcggcgtctgtgtcattacattgtgagcctgcggtactttgagatg
tgtatcctggtagtgatatctatgagtagcattgcattggctgctgaggaccctgtccag
gccaacgctccacgcaacaatgtgctcaagtatctggactatgtctttacgggagttttc
acatttgagatggtgattaagatggttgacctgggccttctgctccatcctggttcttac
ttcagagatctctggaacattctggacttcattgtggtcagtggagcactggtggcattt
gcattttcagggtccaaaggaaaggacatcagcaccatcaagtcccttagagttctgcga
gtcttacggcccctcaagaccatcaagcgcctgccaaagctgaaggctgtgtttgactgt
gtggtcaactccctgaagaacgtcttcaacatcctcattgtctacatgctcttcatgttc
atcttcgctgtcatcgctgtgcaactgttcaagggaaagttcttctactgttccgatgag
tccaagggactggagaaggactgcagaggtaatttcctggactacgataaggatgaggtg
gcygcccagcctcgggtgtggaagaagtatgagttccactatgacaacgtgctgtgggcc
ttcctcactctcttcactgtgtccaccggagagggctggcccgatgttctgaagcactct
gtggacgctaccttagaggaccagggtcccagtccaggctaccgtatagagatctccatc
ttctacgtggtctacttcgtggtctttcccttcttcttcgtcaacatctttgtggccttg
atcatcattaccttccaggagcaaggggacaaggccatgtcagagtgcagcctggagaaa
aatgagagggcctgcattgactttgccatcaacgccaagccactgacgcgttacatgcca
gagaacgtgcagtccttccagtatcggatgtggaagtttgtggtgtcacccccgtttgag
tacgccattatgatcatgatcgccctgaacaccgtggtgctcatgatgaagttccatgga
gctccagacttctacgaagccatgttgaagcacttcaacatcgtcttcactgccctcttc
tctctggagtgcattctgaagatcatcgccttcggaccactgaactacctgaaggatgcc
tggaacgtgtttgactttgtgaccgtgctgggaagtataactgacatcgtggtcacagaa
attaatacaacggaccggcttttgaacctgagttttctgaggctgttcagagcagctcgt
ctcatcaaacttctgaggcaaggctacaccatccgtatcctgttgtggaccttcgtccag
tcctttaaggccctgccctatgtttgccttctgatagcaatgctgttcttcatctatgcc
atcatcggtatgcaggtgttcggaaacattgagctcaacgaggacacagccatcactcac
cacaacaacttccgcacttttcttcaggccctcatgctgctgttcaggagtgccacaggg
gaggcgtggcatgagatcatgctgtcgtgtttgagtcacagagcctgtgatgagaggtca
ggcaacctggggaaggagtgtggcagtgactttgcctatttctactttgtgtccttcatc
ttcctctgctctttcctgatgcttaatctgtttgtggctgtgatcatggataactttgaa
tacctgactcgagactcttctatactggggcctcatcatctggatgagttcatccgtgtt
tgggctgagtacgaccctgctgcctgtggccgtatcaagtacctcgatatgtatcagatt
ctcctccacatgtccccacccttaggtttgggaaagaaatgtccgccaagagtcgcctac
aagcggctagtcaagatgaacatgcccatcgccgatgacaacacagtccacttcacctct
acactcatggccctgatccggacggccctggagatcaaactggcctcagggatggttgcc
cagcgtctctctgatgctgaactgaagaaagagctctcacagatttggccaagcctctca
cagaagactatggatctgttggtgacaccacacaaacccaatgagcttactgttgggaag
gtgtatgcagccctgatgatctttgactactacaagcagaaccgagccaagaggctcaag
gaacagcaacagcagcagcagcaacagaatgctactggctcccaggggaaggttagggct
ctgtttaaaccaatgctgcccctgactcacaagcaggaaaaagtgaaggagaaggccatg
accaacgtggagcctccctgtgagctactgcctcagcctcagtctcaggccctacctaca
cccagttccaccctgctcaacaacggaggcacactgccaggccatgatggcaccatgaaa
ggatcatcctcctgggtgtcagagaagtctagagaggtccacagacccaggaataagaca
cctgtccaagtgggccagtctgaggatgtcccaaacctaaccatcccccaggagtcagtg
gagatgaggaagatggacaccagttgcagtacagtgcctggtcctgggtctggactggag
agccagggaagagctgtgtccatgccccgcctcaacgcagagctgcagaggagcaagtcg
cgccactccccggggaccctgttggcaccagttcctgactgcagcccaatgaaacgctct
gcgtccacccacgccccccagcgcccccaggaggtgaacctgcatgaatacaccctggag
aggcccagcacccaagaaaggcctcaccatcaccaccaccaccaccgctgccaccaccac
cgagagagggacaagaagcagcrgtcactggacaggacgccaagcaccattggtgcacca
ggagacccggctgcagagccctcgtctagagacagagtgcaggaccgcggccgctcccat
gagaggaagaaccactcgacggcgggggagaagcagcgctactactcttgcgatcgctac
agcagcagggaacactgccacaccaccaagtctgccaccaccagctgtgccacctccccc
agcgaggtgcaggaacccagcatcaacaagcagggtagtggttcggttagaggcagccca
gtgatgttgacctcaggggctatcacacctagccgtggacgcaggcagctcccacagacc
cccctgaccccccgccccggggtgacgttcaagaccgcaaactcctcccctgtgcacttt
ttgtctgcccagtgtggcagcggcctgcccaccctgagtcctggccggctgagccgtggg
ctgtctgagcacaacgccctgctgcatagtggcacctatcacatcccctcccccatcacc
cgcatcagctctgagcccttcctgggctacagtcacaatgacccccagtgccagggtagc
ccgtactgcaacctccgggatgagctgctgagcccttatgctgccagagcacgctcccct
cggactccacgtcctcaaatgaggccgggggccctccacctgcctccgccaccccagcag
agacgtgcggtgcccaacggataccactttaccttcggtggtaatggcaacgccagcctg
ggctctggctctggtgccaggccacccaggtactatcgcgaggcagaggaggatgaatgg
tgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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