KEGG   Salegentibacter sp. T436: AO058_09765
Entry
AO058_09765       CDS       T04614                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
salt  Salegentibacter sp. T436
Pathway
salt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:salt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AO058_09765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:salt03019]
    AO058_09765
Enzymes [BR:salt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AO058_09765
Messenger RNA biogenesis [BR:salt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AO058_09765
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 AAA_19 PhoH SWI2_SNF2 Flavi_DEAD
Other DBs
NCBI-ProteinID: APS39143
UniProt: A0A1L6R3N4
Position
complement(2202748..2204097)
AA seq 449 aa
MTFQDLNITTPLRNALEDIGINTPTPIQEESFSTIMSGKDMVGIAQTGTGKTFAYMLPIL
RMLKYSEQKNPRVLVLVPTRELVVQVVEEIEKLTAYMNVRITGIYGGVNMNTQHQSLLQG
QDIVVATPGRLYDLVLRRALQLKSIQKLVIDEVDVMLDLGFKFQINNIFELLPQNRQNIM
FSATITENVENLIEANFKSPQTISVAASGTPLDNIKQTGYKIPNFYTKVNLLKHLLADKE
TYSKVLIFVAYKRMADRLYPELEQYFHDECTVIHSNKTQNYRLRSIKQFGSGFCRILVAT
DVMARGLDIESVSHVINFDTPKYPENYMHRIGRTGRAEKEGNSILMTTEAELESLEKIEA
LMKMEVPQEELPAEIEISSELIPEEQPKVFEINNPGKNKDENAPGPAFHEKKEKNRKENL
GGSYRREIAKKYKKPKTRGDKNANRRKKK
NT seq 1350 nt   +upstreamnt  +downstreamnt
gtgacttttcaggatttaaatattaccactcccctgcgcaatgcgctggaagatattggc
attaacacgcctacacctattcaagaggaatctttttctacaattatgtctgggaaagat
atggtgggcatcgcgcaaaccggtaccgggaaaacctttgcctatatgcttccaatatta
cgaatgcttaaatattcggaacaaaaaaatccgcgggtactggttttggtgcctacgcgc
gaacttgtggtgcaggtagttgaagaaattgaaaaactaaccgcttatatgaatgttcgt
atcaccggtatttatggtggtgtaaatatgaacacgcagcatcaatcgcttttacagggc
caggatattgtggtagccacaccgggaagattgtacgatcttgtacttagacgcgcgctt
cagttaaaatctattcaaaaattagtgatagatgaagtagatgtgatgttagacctgggt
tttaaatttcagatcaataatatctttgaattgcttccgcagaaccgacaaaacattatg
ttttcagcaacaattactgaaaatgttgaaaatctaatcgaggctaattttaaaagtccg
caaactatttctgtcgctgccagtggaacgccccttgataatattaaacaaaccggttat
aaaatcccgaacttctatactaaagtaaatttactaaaacatcttttagccgataaagaa
acctactccaaggtcttgatctttgtggcttataaaagaatggccgaccgactttacccg
gaattagaacagtatttccatgatgaatgcacggttattcattccaataaaacccaaaat
tatcgtttgcgtagtatcaaacaatttggcagcggattttgccgaattttagttgcaacc
gatgttatggctcgtggacttgatattgaatcggtaagccacgtgatcaattttgatacg
ccaaaatatcctgaaaattatatgcaccgaattggccgtaccggaagggccgaaaaggaa
gggaattcgatattaatgactacggaagctgaattggaatcacttgaaaaaattgaagct
ctgatgaaaatggaagttccgcaggaagaattacctgcggaaattgaaatttcttcagaa
ttaattccggaagagcaacctaaggtttttgaaattaataacccggggaaaaataaggac
gaaaacgctcccggccctgcttttcacgagaagaaagaaaaaaacaggaaagagaatctt
ggcggatcttaccgaagagaaattgccaaaaagtataaaaagccaaaaactcgcggggat
aaaaatgcgaacaggagaaagaaaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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