KEGG   Salinivibrio sp. YCSC6: E8E00_02590
Entry
E8E00_02590       CDS       T05946                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
saly  Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:saly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saly03400]
    E8E00_02590
DNA repair and recombination proteins [BR:saly03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     E8E00_02590
    Archaeal homologous recombinant proteins
     E8E00_02590
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_29 Branch AAA_21 ABC_ATPase ABC_tran DUF4972 AAA_15 DUF87 nSTAND3
Other DBs
NCBI-ProteinID: QCF35149
Position
I:594033..597800
AA seq 1255 aa
MKILALRGENLASIQHPFELDFSKGPLGDSGLFAITGKTGAGKSTLLDAICLALYDKIPR
FQANKKNDADIGLGDPATRVKANDVRSILSRGKGEGYAEVDFFAHDGSRWRAHWSVRRAR
GKADGRIQASEHWLENLTTGQRFAGKKQEVLSEIERLVGLSYEQFRRAVMLPQGDFAAFL
KASADDRAALLERMTGTEIYSRLSQMAHERARDEKQALDQLMQQLGDIQLLSEDEEQQLV
DEQAQCQQAVKHHQHQLKMLNDYRQQHTHLAQAQQALDDAQVALDEAEQEKAGVEARRET
LAQIERAQAAREDLNALQRYQWQSLSLGKDLAALARDEQAVAADYERQADRWREANRALT
DAEQAWADIEPKVREAQQIETQLASLDEQMREQNITLNEEQQKWRQAQQTLEQTRAHAQH
LVHRETIIAEQLAAFGDFGHVAEHYQPVFDNLKQFLDCQDALAALSDEHRQRQQQAQQWR
PQRDKLEQDIAQVDASSDQLKTKRAAAEPDRLIAEQEAEQSRYSQLQSTRRLQEAVLNEA
HNWQYWDERCQHNQLEFEKFDAIFRDSQTHLTRLKDTVTRQQAQVDEARHSLQQAMAVME
LEDLRQALNEGDPCPLCGATEHPYLHHAPVVESLIDQQQTRLAELQATLNQSQAEYYYWQ
KQHQQSEHACAELREQGQVWQAERDQYEKGLRVAIAELDSDIDSQTPLRDVLIDIEARAQ
QTQADYVACYQGMTERQQQLAHIQQIDAALSELQQAREQLVARRHHLDQALTECETRLSA
IDEQWHQQQAQRDSRCEALDKQLGKGQWQASLQQVGSARYIRQMEQKIQQYRALQAEREG
MAEEKQRTDTELATLTQQCQSLSDAIQSRQTQLVNLAQQHQQRMAARQALVGDQDLASLE
TEYKSRIDAQRQRRAEAEKAYTQASEQRAGLQARQQTLQQQRQDANQHYRTAVRRWIQWQ
PALGMSQYTLMAHLSLSEAWRADERQALNQIEARYQEAKTRFEEREQQLNHCHQAIATAK
AWFDEQALTDDKTVLETQQAEWQHAQEQAEQRVFDIRHRLTQAEQARQQAGSLTDKIDTQ
RSKTEQWLKLADLIGSASGAKFRNLAQSLTLAQLVEIANEHLASLSPRYALQTVPDSLLA
LQVVDHDMGDEVRSVESLSGGESFLVSLSLALALASLAADTRQLGSLFIDEGFGTLDPDS
LEMALSCLDTLQADGRQIGVISHVSTLVERIGAQVRVDSQGGGASRVLVTQQGVG
NT seq 3768 nt   +upstreamnt  +downstreamnt
atgaaaattctggcattacgtggcgagaacctggccagtattcaacacccgtttgagttg
gacttttcgaagggccctttgggtgatagcggtttgtttgcgatcactggcaaaacgggg
gctggtaaatccacgttgttagatgctatctgtcttgcgctatacgacaaaatcccgcgc
tttcaagccaacaaaaagaatgatgcggatattggtctcggcgatcctgcaacccgagtt
aaagccaacgatgtgcgcagtattttgtcgcgaggaaaaggtgaaggttacgcagaagtt
gacttctttgcccatgacggcagtcgctggcgtgcccattggtcggtacgtcgcgcgcga
ggcaaagccgatggccggatccaagccagtgagcattggctcgaaaacctcaccaccggc
caacgttttgcaggaaagaaacaggaagtgctcagtgaaattgagcgtctggtcgggctc
agctacgagcagtttcgtcgtgcggtgatgctcccccaaggggattttgcggcttttttg
aaagcgtcagcagatgatcgcgcagcactgctggagcgaatgactggcaccgaaatttac
agccgtttatcccaaatggcccatgagcgtgcccgtgatgaaaaacaagcactggatcag
ctcatgcaacagctcggtgacattcagctccttagcgaagatgaagagcagcaattggta
gatgaacaagcccaatgccaacaggcggtcaaacatcatcaacaccaactcaaaatgctg
aacgactaccgccagcaacatacccacttagcgcaggcgcaacaagcacttgatgacgcg
caagtggcactggatgaggcggaacaagaaaaagcgggtgtggaagcgcgccgagagaca
ttggcacagattgaacgtgcccaagcggcgcgagaggatctcaatgcgctgcagcgttac
cagtggcagtccctatccttggggaaagatctagctgcactagcccgagatgaacaggct
gttgccgccgactatgagcgacaagcggatcgttggcgagaagccaatcgcgcattgacc
gatgccgagcaagcgtgggctgatatagagccgaaggtgcgtgaggctcagcaaatcgag
acccaattagccagtcttgatgagcaaatgcgtgagcaaaacatcaccctcaatgaagaa
cagcaaaaatggcgtcaagcgcaacagacccttgaacaaacccgtgcccatgcacagcat
ttggtgcatcgtgaaacgatcattgctgagcaactggcagcgtttggcgatttcggtcac
gtggctgagcactatcagccggtgtttgacaacctcaagcagtttcttgattgccaagat
gcgctagccgcactgagtgatgagcatagacagcgacagcagcaagcccagcaatggcgc
cctcagcgcgataagcttgagcaggatattgcgcaagtggatgccagcagtgaccagtta
aaaacaaaacgagcggctgcagaacccgatcgcctgatcgcggagcaagaagccgaacaa
tcgcgctatagccaattgcagtctacccgtcgtctacaagaggcggttttaaatgaagca
cataactggcaatactgggacgagcgctgccaacataatcagttggagttcgaaaaattt
gatgccattttccgcgatagccaaacccacctaacgcgtttgaaagacacggtaacgcgc
caacaagctcaggttgacgaagcgcgtcacagtttgcagcaagcgatggccgtgatggag
ttggaagacttgcgtcaggcgcttaacgagggagacccttgtccgctttgtggggcgact
gagcatccttacttacaccatgcgcctgtagtggaaagcttgattgatcagcagcaaacg
cgtcttgctgagctgcaagcgacactcaatcaaagccaagcagaatattactactggcaa
aagcaacaccagcaaagtgagcatgcatgtgctgagttgcgagagcagggacaagtatgg
caggcggagcgtgatcaatacgaaaaagggctgcgtgttgccatcgctgaattggatagt
gacatcgacagtcagacgccactgcgtgatgtgctcatcgatattgaagctcgtgcccaa
cagacgcaagcggactatgtggcctgttatcaaggcatgaccgaacgtcagcaacagctt
gcccatattcagcagattgatgcggcactcagtgagttgcaacaagctcgagagcagctt
gttgcccgtcgtcatcacttagaccaagcgctaaccgaatgtgaaacacgccttagcgcc
attgacgaacaatggcaccagcaacaagctcagcgtgatagtcgctgcgaagcactcgat
aaacagctaggcaaaggccaatggcaggccagcttacaacaagttggctccgcacgttac
attcggcaaatggagcaaaaaatccagcaataccgcgctttgcaagcggagcgtgagggg
atggcggaagaaaagcagcgtaccgacaccgagcttgccacgctcacacagcagtgtcag
agcttgtcagatgccattcagtcacgtcagacgcagttggtgaacttggcccaacaacat
cagcagcgtatggcggcgcgacaagcgctggtgggggatcaggatcttgcgagcttagaa
actgagtacaaatcacgcatagacgcgcagcgccagcgtcgagctgaggcggaaaaggcg
tatacgcaagccagtgaacaacgcgccggcttgcaagcccgtcagcaaactttgcagcag
caacggcaagatgctaatcagcactatcgtaccgccgttaggcgttggatccagtggcaa
cctgcgctgggaatgagtcagtatactttgatggcgcatttatcattgagcgaggcttgg
cgggcggatgaacgccaagctttaaaccagattgaggcgcgctatcaggaagcaaaaaca
cgctttgaagaacgtgaacagcagctaaatcattgtcatcaggccattgcgaccgccaaa
gcgtggtttgatgaacaagcgctgacagatgacaagacagtcttggagacgcagcaagcc
gagtggcaacacgcgcaagagcaggctgagcagcgtgtgttcgatattcgtcatcggctg
acgcaagccgagcaggcacgtcagcaagcggggagtttaacggacaaaattgatacccag
cgcagcaaaacggaacaatggctaaaactggccgacttaattggctcggccagcggtgcc
aaatttcgtaaccttgcccaatcactcacactcgcccagctggtggagattgccaacgag
caccttgcttcgctctcccctcgctacgcgctgcaaaccgtacccgacagtttgttagca
ttgcaggtggtggatcatgatatgggagatgaagtgcgcagcgtggaatccctctctgga
ggagagagtttcttggtttctttgtcgctggcactggcgctcgcctcattagcggcagat
acccgtcagttaggatcgctgtttatcgatgaaggctttggcaccttggaccctgacagc
ttagagatggcgctgtcgtgtctcgataccctgcaggcggatggacgccaaattggtgtg
atctctcatgtgagtacgttggtcgagcggattggcgcccaagttcgcgtagacagtcag
ggcggaggtgcaagtcgcgtgctggtcacacagcaaggtgttggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (12)   
   Pfam (12)   
All databases (17)   

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