KEGG   Salinispora arenicola: Sare_1354
Entry
Sare_1354         CDS       T00613                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
saq  Salinispora arenicola
Brite
KEGG Orthology (KO) [BR:saq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:saq03009]
    Sare_1354
Enzymes [BR:saq01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Sare_1354
Ribosome biogenesis [BR:saq03009]
 Prokaryotic type
  ribosomal protein modification factors
   Sare_1354
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TraT CLP1_P
Other DBs
NCBI-ProteinID: ABV97255
UniProt: A8M773
Position
1563040..1564563
AA seq 507 aa
MVSATSASPADGRRVALLTLGCARNEVDSEELAARLHADGWQVTTDGEGAEVVVVNTCGF
VEKAKQDSIQTLLAAAETGAKVVAAGCMAERYGRELADSLPEAQAVLSFDDYPDISDRLG
AVLAGTAIDAHTPRDRRELLPLTPVRRREAAVSLPGHGTRAAAAGPGGRSAPVEVDEHTP
AHLRPVLRRRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRPPEELLAEAEWLARTG
VRELVLVSENSSSYGKDLGDPRALEKLLPQLAAVDGIVRVRASYLQPAETRPGLVEAIAT
TPGVAAYFDLSFQHSSEPVLRRMRRFGSTERFLDLLASVRALAPEAGARSNFIVGFPGET
RADVAELVRFLNEARLDAIGVFDYSDEDGTEAAGLSGKVSATTVKRRYDRLGALADELCA
QRAEQRLGSTVQVLVDSVDDGVVEGRAAHQAPEVDGSTTLVAPSGGGVDLAALRPGDLVR
CTVTATEGVDLVAVPDGMISAAPGVAR
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggtgtctgccacctccgcttcacccgccgacggccgccgcgtcgccctgctgaccctg
ggctgcgcccgcaacgaggtcgactcggaggagctggctgcccgcctgcacgccgacggc
tggcaggtgaccaccgacggtgagggcgccgaggtggtggtcgtgaacacctgcgggttc
gtcgagaaggccaagcaggattcgatccagacgctgctggccgccgccgaaaccggtgcc
aaggtggtggcggccgggtgcatggccgagcggtacgggcgggagctggcagacagcctg
cccgaggcgcaggcggtgctgagcttcgacgactacccggacatctccgaccgactgggt
gcggtgctcgccggaaccgcgatcgacgcacacaccccgcgcgatcggcgggagttgctg
ccgctcacccccgtgcggcgtcgagaggcggcggtgtcgctgccgggccacggcacccgg
gccgctgcggctggtcctggcgggcggtccgctccggtcgaggtcgacgagcacacgccg
gcgcacctgcgcccggtgctgcgccgtcggctcgacaccgggccggtagcgtcgctcaag
ctggccagcggctgcgaccggcggtgcgcgttctgcgccatccccgccttccgtggcgcg
ttcgtctcccgcccgccggaggagctactcgccgaggcggagtggctggccaggaccggg
gtgcgggagctggtgctggtcagcgagaactccagctcctacggcaaggatctgggcgac
ccgcgagcgttggagaagctgctgccccaactcgccgcggtcgacgggatcgtccgggtg
cgggcgagctacctgcaaccggccgagacccgtcccggtctggtcgaggcgatcgccacc
acaccgggggtggccgcgtacttcgacctgtcgttccagcactccagtgagcccgtgctg
cgtcggatgcgtcggttcgggtccaccgagcggttcctggatctgctggccagcgttcgg
gcgctggccccggaggcgggcgcgcggagcaacttcatcgtcgggttccccggtgagacc
cgggccgacgtcgccgagctggtccggttcctgaacgaggcgcggctggacgcgatcggc
gtgttcgactacagcgacgaggacggcaccgaggccgccggtctgtccggcaaggtctcg
gccaccaccgtcaagcgccgctacgaccggctcggtgcgctcgccgacgagctgtgcgcg
cagcgggccgagcagcggctcggctcgacggtgcaggtgctggtcgactcggtcgacgac
ggcgtggtggagggtcgcgccgcacaccaggcgcccgaggtcgacggctcgaccaccctg
gtcgcgccgtccgggggcggcgtggacctggctgcgctgcgtccaggcgatctggtccgg
tgcacggtcaccgcgacggagggtgtggatctggttgccgtaccggatgggatgatctcg
gcggcgcctggcgtggcacggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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