KEGG   Salmo salar (Atlantic salmon): 106569147
Entry
106569147         CDS       T04363                                 
Symbol
dhx30
Name
(RefSeq) DExH-box helicase 30
  KO
K13185  ATP-dependent RNA helicase DHX30 [EC:5.6.2.6]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sasa03041]
    106569147 (dhx30)
   03029 Mitochondrial biogenesis [BR:sasa03029]
    106569147 (dhx30)
Enzymes [BR:sasa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106569147 (dhx30)
Spliceosome [BR:sasa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106569147 (dhx30)
Mitochondrial biogenesis [BR:sasa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    106569147 (dhx30)
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind DEAD HA2_C Dicer_dimer AAA_22 HA2_N AAA_19 ATPase nSTAND3 AAA_16
Other DBs
NCBI-GeneID: 106569147
NCBI-ProteinID: XP_013995654
UniProt: A0A1S3LY94
Position
ssa14:29542210..29553927
AA seq 1171 aa
MALPGSVLVRLRALCNLGKSLDTGNTIGQNYNRVRWYKTKAKSYQDTAASAGQTRRGSEL
LKEFPEPKNLLFTTISRSLGVSDLSQHIQYHCTEDGGLKRATVTLLWPSKMEVEGFARKK
IDAERYAAAAACHKLREMGVLGPDNQVARRSVGRGRGPPLSALEDLEECRWTDVHVPRRD
LQNGSLEPRIQSSVYRAPEENSELSQALSMFVNPKALLTRVIQVATSSNRFRELVQYKTV
GGKMKRCELTMRWPEEITFVASGLRRVDAERRAAALACLKLKEMELLDEDNQPLTHAMYH
KEEMREAGQRDRQPCHLDIPEYLEHSAREYLTQYPVATEMQKLWEEEEERSQQRLNQQDE
EEEEDLVTDAITGRLYRPLSNQEAEQLSADLQEEWERAAPGLGVELPVDAHRERVVSAVE
SSRVIVVAGETGCGKTTRIPRFLLEGRVRGGEGAECNILVTQPRRISAVSVAHRVAHEMG
PALKRSVGYQVRLESRPPEHSGGALLFLTVGVLLRKLQGNASLRGVSHVVVDEVHERDVN
TDLLLALLRPALRDNPNLRVVLMSATGDNQRLAQYFGGCPVVSVPGFMHPVRDRYLEEVL
TEMGSPPPLPTRTDFQRREKDDATPDLDLVANVIEHIHRQGEPGAVLCFLPGWQDIKAVQ
KRLEEKPTFRSGSQIILPLHSSMSVGDQQAVFQRPPEGRRKIVLATNIAETSITIDDIVH
VVNAGSQKEQNYDTRTKVSCLDTVWISRSNVTQRRGRAGRCQPGHAYHLFPRQRLESMTT
FPVPEILRTPLESLVVQAKIHSPHCKAVDFLSQVLDSPEREAVTDAVRNLQEIGVLDKTE
ALTPLGERVACLSCDPRLGKVLVLAALFRCVLPLLSVTACLTRDPFHNSMQNRALVSKAK
EDLGGSSYSDYLVFSRAVLGWRSVQQEGDRETRQDYLNRYTLSGASLRFINGLTSQFSEN
LLEAGLVERSADCQRSSSLYNQHSHQDELVKAVLLAGLYPNLIQVKRGAVTKGRFRPNSL
SFRTQSGPVLIHRSSVNRGEEQFPSRWLTFFSAIKSNGNVFIRDSSAAHPLALLLLTDCD
ITERVNGDRVEVAFPGRSLVRCELSVQTWEMLWELRSSIQTMLYRNLRPHSSANYITQDG
KLISLLVELLNNTESNTDPQPNGGHSDSEVD
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggcgctgcctggttcagtactcgtgcgactcagagcgttgtgtaaccttgggaaatct
ttggatacagggaacacaattggacaaaattacaatcgggtccggtggtacaagacaaaa
gccaagagctatcaggacactgcagcgtcagcgggccagacaagacggggtagtgagctg
ctgaaagagttccctgaaccgaagaacctgctgtttaccaccatatcccggtcgcttggg
gtgtctgacctctcccaacacatccagtaccactgcacagaggatgggggtctcaagaga
gctactgtcacactcctctggcccagcaagatggaggtggagggctttgctcgcaagaag
attgatgctgaacgatacgctgcagctgctgcctgtcacaagctgagggagatgggtgtg
ctgggtccagacaatcaggtggctaggaggagtgtgggacgagggcgagggccaccactg
tcagccttagaggacctggaggagtgtcggtggacagatgtccatgtgcctagacgagac
ctccagaatggatccttggaacctcgcatacaatcaagtgtttacagggcacctgaagaa
aattctgagctctcccaggctctttccatgttcgtaaatcctaaagctctgctgaccagg
gtcatccaggtggccacgtcctccaacagattcagggagctggtacagtacaagacggtg
ggcggtaagatgaagagatgtgagctgaccatgcgatggccagaggagattacgtttgtg
gcctcgggccttcgcagagtggatgcagagaggagagctgctgcactggcctgtctcaaa
ctgaaggaaatggagctgctagatgaggacaaccaacccctgacccatgctatgtaccac
aaggaggagatgcgtgaggcggggcagagagacagacagccctgtcatctggacatacct
gagtacttggagcatagcgccagagaatacctcacacagtatccagtggcgacagagatg
cagaagctgtgggaggaagaggaggagagaagccagcagaggctgaaccagcaggacgaa
gaggaggaagaggacctcgtcacagacgccatcacaggcaggctgtaccggcccctctct
aaccaggaggccgagcagctgagcgccgacctacaggaggagtgggagagggcagcgcct
ggtctgggtgtggagctcccggtcgacgcccaccgggaacgcgttgtgtcagcggtggag
tcctccagggtcatcgtggttgctggggagacgggatgcggcaagacaacgcgtatcccg
cgcttcctgctggaggggcgtgtgcggggtggggagggggcggagtgtaacatcttggtc
acccagccccggaggattagcgctgtgtcagtggctcaccgtgttgcccacgagatgggc
cccgccctcaagcgctctgtagggtatcaggtgcgtctggagagccgtcccccagagcac
agcggtggggcccttctcttcctgacggtgggggtgttactgaggaagctgcagggtaac
gcctccctgaggggggttagccacgtggtggtggacgaggtccacgagagggacgtcaat
acggacctgctgctggccctgctgcgacccgccctaagggacaaccccaacctccgcgtc
gtgctgatgagtgccacaggagataaccagaggctggcccagtacttcgggggctgcccc
gtggtcagtgttcccgggttcatgcaccctgtcagggatcggtacctggaggaggtcctt
acggagatggggagtccaccgccactcccaacgaggacagactttcagagacgggagaag
gatgatgccacgccagacctggacttagtagctaatgtgatagagcacatccacagacag
ggagagccaggtgcagtgctgtgtttcctaccaggttggcaggacattaaggctgtccag
aagagactcgaggagaaaccaaccttccggtctggctctcaaattatcctaccattacac
tcaagtatgtcggtgggtgaccagcaggccgtgttccagcgcccccctgagggccggagg
aagatcgtcctggccaccaacatcgctgagacctctatcaccatcgacgacatcgttcac
gtagtaaacgcgggctctcagaaggagcagaactacgacacacggaccaaggtgtcatgt
ctagacacagtctggatctcgcgctccaacgtcactcagcgtagagggagggcggggcga
tgccagcccggacatgcctaccacctgttcccacggcaacgcctggaatcaatgacgacc
ttccctgtgcctgagatcctacgcacccctctggagagcctggtggtacaggccaagatc
cacagcccccactgcaaggcagtggatttcctatcgcaggtgttggacagcccagagcga
gaggctgtgaccgatgctgttcgcaacctgcaagagattggtgttctggacaagaccgag
gccctgactcccctgggggagagagtagcctgtctgtcctgtgacccgcgcctggggaag
gtgctggtgcttgctgctctgttccgctgtgtgctgcccctgctgtcagtcacagcctgt
ctcaccagagaccctttccacaacagcatgcagaacagagccctggtctcgaaggctaag
gaagacctgggaggttcaagctacagtgattacctggtgttcagtcgagccgtgttgggc
tggaggagtgttcagcaagagggggacagagagaccagacaggactacttgaacagatac
acactgtctggagccagcctgcgcttcatcaatggtctgacctcccagttcagtgagaac
ctgcttgaggctgggctggtggagcgttcagctgactgccagagatcctcctccctctac
aaccaacacagccaccaggacgagctggtcaaggctgtgctgctggccggactctacccc
aacctcatacaggtgaaaaggggagcagtgaccaaaggtcgcttccgccccaacagcctg
tcattccgtacgcagagtggcccagtgctcatacaccgctcctccgtcaacaggggagag
gagcagttccccagtcgctggctgaccttcttcagtgcgatcaagtccaacggtaacgtt
ttcatcagagactcctcagcagcccaccccctcgccctactgctgctcaccgactgtgac
atcactgagagagtgaatggtgaccgtgtggaggtggcattcccggggcggtcgctggta
cgctgtgagctgtctgtccagacatgggagatgctgtgggagctacgctcctccatccag
accatgctgtaccgcaacctccgcccacacagctcagccaattacatcacacaggacggc
aagctcatctcgctattggtggagctgctgaacaatactgagtccaatacagacccccag
ccaaacggtggccacagtgactctgaggtagactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system