KEGG   Salmo salar (Atlantic salmon): 106610980
Entry
106610980         CDS       T04363                                 
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD9
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:5.6.2.5]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106610980
Enzymes [BR:sasa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     106610980
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    106610980
SSDB
Motif
Pfam: TUDOR Helicase_C DEAD HA2_C ResIII nSTAND3 AAA_14 AAA_22 AAA_19 PhoH T2SSE FtsK_SpoIIIE HA2_N NACHT
Other DBs
NCBI-GeneID: 106610980
NCBI-ProteinID: XP_014066218
UniProt: A0A1S3SPE3
Position
ssa09:24654730..24685824
AA seq 1344 aa
MKKAITAEQITEWFTLGTQFANIRITDEPPKKVKSEESSRQSPAKAPQQQVSPKSEGGGL
RNKTGKPDFSASAPPPPLASYDYPSLPITKNRQELISLIENNSVVIIRGATGSGKTTQLP
QFILDYYSEKNAPCNLVVTQPRKIGASSIARWVARERKCTLGSLVGYQVGLEKMATEHTR
LIYMTTGVLLQKLVGAKSLTEYSHIFIDEVHERTEELDFLLLVVRKLLQSNSRYIKVILM
SATINCREFAEYFGTPIRSQMNPAYVFEVEGAPYTIEEFYLDDLCSLIPYRVDTHHPDEP
YITVEMYNVAVSLIQSFDELEAKDQSRTEREGGLSLPDRGSVLVFLPGLGEIHYMQEALS
KLVRKRLQVYPLHSSVTLEEQNGVFLVPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLA
RHMVCDKETSYQSLRLTWASKTNCNQRRGRAGRVSKGYCYRLVTKEFWRNEIPDYVVPEL
VRAPLANIMLKVKLLDMGDPRSLLSTALSPPNLNDIERTVLQLKEMGALSLGNNGQGQKR
FDGELTFLGRMLAHLPVDLHLGKMIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQLAG
YRSKLSFAHGVPSDSIAFVNAFKAWHTSRNKGELRHPKDELEWGKENCIQIKRIREVAEL
YEDLKKRASQFNMHVIENPLPMDYSSLHKQRFILQVVIAGAYYPNYFAQGEMDEELASKE
LSGHDPKTTVLVRNLPPYSFLYYKQLQSLFRQCGQVKSIAFDGSRGHVEFYRTTTRGSGV
LPEVSLALLLAHQRHPLDLFVHPSDEVEARAGSMTVCHMRYARPVVCRVNVDFQDNSVYP
VGVLSSTVDPDKLPSNPIFVVNITEVVEVGHFWGFQAGEASMEKQRYLTAEINSRELCPV
LVSLYPNLLCLAPFSEGDEQGLYYRAKILHVRGSSVEVFFLDYGNTTLVSCSCLRELPAD
IMAHPLQAQEFRISGMHPSAQSMILGDQWSSPARNRFITLVNGRSLIVSLFSILHGVMHV
ELLINTDTVTSSVADIMIQEGHAIKAEESFESKQSHEVLVSLYKDLQDGTFTPNATSSSW
KTNKEKEKQLIDSLLQSFSKTSRSFLKSKVPVHGPSSPHKVNFHSFCNVSHYRSVRIEKD
SINSVALNDCPQDSHQRMLVAGVVSVNATGACILLKETTLMPHIHGLPALITMLFSPVIE
LRTNEERTSYTGALCGLGWNVQSQEAVLPEHDIELAFDVKFDVEDITEINALRGAINRLV
CEGPNGPLHLGPDRINSLQEDCRERLVRLFTKSPPREDLVPVYYEEPNKWNQVDPSQKME
IVQKEDGKNKGVLFQLHPVTLLNM
NT seq 4035 nt   +upstreamnt  +downstreamnt
atgaagaaagcaataactgcagaacagataacagaatggtttacattaggcacccaattt
gctaacattagaattacagatgaacctccaaaaaaagtaaagtcggaggagtcatcaaga
cagagccctgcaaaagctccccaacagcaggtcagcccaaagagtgaaggtgggggactg
aggaacaagacaggaaagcctgacttttctgcgagtgcgcctccacccccattagccagt
tatgactaccccagcttgcccatcacaaagaatagacaggagctcatctctctgatcgag
aacaactctgtggtgatcattcgtggagccacaggcagtgggaaaactacccagctgccc
cagttcatcctggactactacagcgagaagaatgccccctgtaaccttgtggtcacccag
cctcgcaaaataggcgccagcagcattgcccgatgggttgccagagagcgcaagtgcacc
ctgggtagtctggtgggataccaggtgggcctagagaagatggccactgaacacaccaga
ctcatctacatgaccactggggtgctgctgcagaaactggtcggcgccaagagcctgact
gagtactcccacatcttcatagatgaggtccatgaacggacggaggagttggactttctc
ctgttggttgtgaggaagctcctccagtccaactctcgttacatcaaggtcatcctcatg
tcagccaccatcaactgcagggagtttgcagagtactttggcacccctatccgcagccag
atgaacccagcctatgtgtttgaggtggagggggctccctacaccatcgaggagttctac
ctggatgacctctgcagcctgattccttacagggtggatacacaccatccagatgaacct
tacatcactgtggagatgtacaacgtggctgtcagccttatccagagctttgacgagctg
gaggccaaagatcagagcaggactgagcgggagggaggcctgtctctgccagaccggggc
agtgtgctggtgttccttcctggtctgggtgagatccactacatgcaagaggccttgtct
aagctggtgcgcaagagactgcaggtgtaccctctccactcctctgtcactctggaggag
cagaacggggtgtttctggtgcctgtcccagggtacaggaagatcatcctctccaccaac
attgcagagagctctgttacagtcccagatgtcaaatatgtgattgatttctgtctggcg
cgtcacatggtctgtgacaaagagaccagttaccagtccctccgcctcacctgggcctcc
aagaccaactgcaaccagcgcagaggcagggctgggcgagtgtctaagggctactgttac
cggctggtgaccaaggagttctggaggaatgagatcccagactatgtggttcctgagttg
gtgcgtgcccccctggccaacatcatgctgaaggtgaagctactggacatgggggacccc
cgctccctcctctccactgccctctcaccccccaacctcaatgacattgagaggactgtg
ctccagctcaaagagatgggcgcactgtccctggggaacaatgggcagggccagaagcgt
tttgatggagagctgacgttcctgggtcggatgctggctcacctgcctgtggacctgcac
ctggggaagatgatcgtactcggacacgtctttggctgtctggaggagtgcctcatcata
gccgcctccctgtctctgaagagcttctttgccatgccctccctacaacaactggcaggc
tacaggagcaagctgtcctttgcacacggtgtgccgagtgattccattgcttttgtcaac
gcattcaaagcttggcacacgtccagaaacaagggagagttgaggcacccaaaggatgag
ctagagtggggcaaggagaactgcatccagatcaagaggataagagaggtggccgagctc
tatgaggacctgaagaagagggcgtcccagttcaacatgcacgtgattgagaacccattg
cccatggactactccagtctccacaagcagagattcatcttgcaggtggttatcgctggt
gcctactaccccaactactttgcccaaggggaaatggatgaagaactggcctccaaagag
ctgtctggccatgatcccaaaacaacagtgctggtgaggaacctgcccccctatagtttc
ctgtactataagcagctgcagtccctgttccgccagtgtggccaggtcaagtccatagcc
tttgatggatccagagggcatgtggagttctaccggacgactacccgggggtcgggggtg
ctccctgaggtgtcactggccctcctcctggcccaccagaggcatcctctggacctgttt
gtgcaccccagtgacgaggtggaggcccgcgctgggagcatgaccgtctgccacatgaga
tacgctcgtcctgtggtttgcagggtgaatgtggacttccaggacaactcagtctaccca
gtgggggtgctgagtagtaccgtcgacccagacaagctgccttccaaccccatcttcgtg
gtcaacatcacagaagtggtggaggtgggccacttctggggcttccaggcaggcgaggcc
agcatggagaagcagcgctatctgacagctgagattaattctcgtgagctgtgtccagtt
cttgtctccctctaccccaacctactgtgcctggcacctttctctgagggcgacgagcag
ggcctctactaccgtgccaagatcctgcacgtccgcggcagctctgtggaggtgttcttt
ttggactacggaaacaccaccctggtgtcatgcagctgtctgagggagctacctgctgat
atcatggcccacccattgcaggcccaggagtttcgtatctcggggatgcatccatcagcc
cagtccatgatcctgggggaccagtggagcagccccgcacgcaaccgcttcataacactg
gtgaacggccgctcactcatcgtctccctgttctctatcctgcatggcgtcatgcacgtg
gagctgctcatcaacactgacacggtcacctccagtgtggctgatatcatgatacaggag
ggacacgccattaaggccgaagagagctttgagtccaagcagagccacgaggtgctggtt
tctctgtataaagacttgcaggacggaaccttcacccccaatgctaccagcagctcctgg
aagaccaacaaggagaaggagaagcagctcatcgacagcctgctccagtccttctccaag
accagccggtcctttttgaagagcaaggttcctgtgcatggcccatccagccctcacaaa
gtcaacttccacagcttttgcaatgtcagccactacaggtcggtgcgcatagaaaaggac
agcatcaactcagtggcgttgaatgactgtcctcaggacagccatcagaggatgctggtg
gccggcgtagtgtctgtcaatgccacaggcgcatgcattctactgaaggagactacgctg
atgcctcacatccacggcctgcctgccctcatcaccatgctcttcagccctgtcatagag
ctacgcaccaatgaggagagaaccagctacactggcgccctctgtggtctggggtggaac
gtccagtctcaggaggctgtcctacctgaacatgacatagagctcgcctttgatgtcaaa
ttcgatgtagaggacatcacagagatcaatgcgttgcgtggtgccatcaaccgtctggtg
tgtgaggggcccaacggtcctctgcacctggggcctgacaggatcaacagcctgcaggag
gactgccgcgaacgcctcgtcaggttatttaccaagtcacccccccgggaagaccttgtt
cctgtgtactatgaggaaccaaataaatggaaccaggtggatcccagtcagaagatggag
attgtccagaaggaagatggaaagaacaaaggtgtcctgttccagctacaccctgtcaca
ctgctcaacatgtga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (14)   
   Pfam (14)   
All databases (62)   

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