KEGG   Sulfurospirillum barnesii: Sulba_2354
Entry
Sulba_2354        CDS       T02139                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sba  Sulfurospirillum barnesii
Brite
KEGG Orthology (KO) [BR:sba00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sba02048]
    Sulba_2354
Enzymes [BR:sba01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Sulba_2354
Prokaryotic defense system [BR:sba02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Sulba_2354
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII Helicase_C RNA_helicase DUF87
Other DBs
NCBI-ProteinID: AFL69623
UniProt: I3Y099
Position
2302495..2305638
AA seq 1047 aa
MNKFTEDKLEQAFIELLHEQEIIHQNGKELIRHESDVLLKDDLKEYLAARYESQHITKSE
IDQIIRILENYPSNDLYDTNKAIMKLVSDGFIFKREDANEKDIFIELIDYENLDKNTFKI
VNQLEIIGYEKRIPDGILYINGLPLVVFEFKSAIREEATIHDAYVQLTTRYRRDIPELFK
YNVFCIISDGVNNKVGSFFSPYEFFYAWRKITGNEVEVDGIASMHSMIKGAFNRERLIDI
IHNFIYMPDKSKKEEKIVCRYPQYYATKKLYDNIKLHQKPHGDGKGGTYFGATGCGKSFT
MLYLTRLLMKSIHFSSPTIILITDRTDLDVQLSSQFSNAKSFIGDDGIVSVESREDLRQK
LRGRESGGVFLTTIHKFTEDIELLSNRENIICISDEAHRSQINLDQKIKTTKDGVKKTFG
FAKYLHDSLPNATYVGFTGTPIDGTLDVFGDVIDSYTMTESVRDEITVKIVYEGRAAKVL
LDNSKLHEIEAYYEECANVGANEHQIDESKKAMANMENILGDPKRIKALAKDFVEHYETR
VSEGATLKGKAIFVSSSRPIAYALFKEIIALRPQWNEKRICDENVELSEKEKKKILPLEK
LKMIMTRNKDDEKELYNLLGTKEYRKTLDTQFKNEKSNFKIAIVVDMWLTGFDVPCLDTI
YIDKPIQQHNLIQTISRVNRKYADKDKGLVVDYIGIKTAMNKALKQFSKVDSKNFEDIQA
SIVVVKDHLDLLSKLFHKFDSHLYFSGTTLEQLECLNLASEYVQLTKELETRFIYLVKRL
KSAYDICCGSEEFTQLEKDFIHFYLAVRSIVVKLTRGDAPDTAQMNAKVAKMIEEALKSD
GIQVIYKLGSEEESKIDIFDEDYINKINKIKLPNTKIKLLQKLLAKALEEFKKTNKVKAI
DFSKKFTALVAKYNERKEEDVLVSEVLEDFTDEIIDLYNALKKEKESFGDLGIDFEEKAF
YDILKMISIKYDFSYPDDKLIALAKEVKIVVDDKSKYTDWNIREDIKAELKVDLIMLLAK
HGYPPITKDEVFKEIFEQAENFKKFRQ
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgaataaatttacagaagataaattagagcaagcatttatagagttgcttcatgagcaa
gaaattatccatcaaaacggcaaagagctgataagacatgagagtgatgtactcctcaaa
gatgatctcaaagagtatttagctgccagatatgaatcccaacatattaccaagagcgaa
atcgatcaaatcattcgcatattagaaaactatccttcgaatgatttgtacgataccaat
aaagctattatgaaactagtatctgatggatttatctttaagcgagaagatgcaaacgaa
aaagatatttttatagaactgatagactatgaaaatttagacaaaaacaccttcaaaatt
gtcaatcagctagaaatcattggctatgaaaaacgaatccctgatggtattctctatatt
aacggtttacctcttgtagtctttgaatttaaaagtgccattcgagaagaagcaacaatt
catgatgcgtatgtgcagcttactacacgataccgaagagatattccagaactttttaaa
tacaatgtattttgtatcatcagcgatggagtgaataataaggtaggttcatttttctca
ccctatgagtttttttatgcttggagaaaaatcacaggtaatgaagtagaggtggatggt
attgcttctatgcactccatgattaaaggagcatttaatcgtgaacgactcatcgacatt
attcataattttatttacatgcccgacaaatcaaaaaaagaagaaaaaatagtttgtcga
tatcctcaatattacgctactaaaaaactctatgacaatataaaacttcaccaaaaacca
cacggtgacggtaaaggtggtacctattttggtgctacaggatgcggtaaaagctttacc
atgctttatctcactcgattgcttatgaaaagtatccatttttctagtcctacgatcatt
cttatcactgatagaacagacctagatgtacagcttagtagtcaattttcaaatgctaaa
agttttataggtgatgatggtattgtcagtgttgagagccgagaagatttgagacaaaaa
ttacggggcagagaaagcggtggtgtttttttaaccaccatccataaattcacggaagat
attgagctacttagcaatagagaaaatatcatctgtatatccgatgaagcgcatagaagc
caaatcaacctagatcaaaagattaaaaccacaaaagatggtgttaaaaagacattcggt
tttgcaaaatacctgcatgattcattaccaaatgcaacctatgttggatttacaggaacg
ccaatcgatggaactttagatgtttttggcgatgtcattgatagttataccatgactgaa
tccgttcgagatgagattactgttaagatcgtttatgaaggaagagcagcaaaagtattg
ctggataacagtaagcttcatgagatagaagcatattatgaagagtgcgctaatgtcgga
gcaaacgagcatcaaattgatgagagcaaaaaagctatggcaaatatggagaacattctt
ggtgatcctaagagaataaaagccttagcaaaagattttgtagaacattatgaaacaaga
gtaagtgaaggagccacgctcaaaggtaaagctatatttgtttccagtagtagacctata
gcctatgccctttttaaagagattattgctttacgaccacaatggaatgaaaagcgtatc
tgtgatgaaaatgtagagcttagcgagaaagagaaaaagaagatactacctcttgaaaaa
ctcaaaatgattatgactcgaaataaagatgacgaaaaagagttatacaatcttctagga
accaaagagtatagaaagacactcgatacgcaatttaaaaatgaaaaatcaaactttaaa
atagccattgttgtagatatgtggcttacaggatttgatgtaccatgtttagatacgatc
tatatagacaaacctatacagcaacacaatcttatccaaacaatttcaagagtaaataga
aaatatgcagataaagataaagggcttgttgtagattacattggtatcaaaacagccatg
aataaagctttaaagcaattttcaaaggttgatagtaaaaactttgaagatatacaagcc
tctattgtagtggttaaagatcatttagacttgctttcaaaactttttcataaatttgac
agccatttgtactttagcggaaccacactagaacaacttgagtgtttaaaccttgcaagt
gaatatgttcaattgactaaagagcttgaaacacgctttatctatcttgttaaacgatta
aaatctgcctatgatatttgttgtggtagtgaagaatttacgcaactcgaaaaagatttc
attcatttttatttagctgttcgctcaattgtcgtgaaactaactcgtggcgatgccccc
gatactgcacaaatgaatgcaaaagttgcaaaaatgatagaagaagctcttaaaagcgat
ggcattcaagtgatctataaattaggcagtgaagaagaatcaaaaattgatatttttgat
gaagattatataaacaaaatcaataaaataaagctacctaatacgaagattaagctattg
caaaagcttttagccaaagcattagaagaatttaaaaaaacaaataaagtcaaagcaatt
gatttttcaaaaaaatttactgctttagttgcaaaatacaatgaaagaaaagaagaagat
gtacttgtcagtgaagtccttgaggacttcactgatgagatcattgatctttataatgca
ttgaaaaaagagaaagagtcatttggtgatttgggcattgattttgaggaaaaagctttt
tacgacatattgaaaatgatctctattaaatatgacttttcatatcctgatgataaatta
atagcccttgcaaaagaagtcaaaattgtcgttgatgataaatctaaatataccgattgg
aatatacgagaagacatcaaagctgaactcaaagtggatttgattatgttgcttgccaaa
cacggctatccaccaattactaaagatgaagtgtttaaagagatatttgaacaagctgag
aattttaagaaatttaggcaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (89)   

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