KEGG   Shewanella benthica: SHEWBE_0175
Entry
SHEWBE_0175       CDS       T06707                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
sbk  Shewanella benthica
Pathway
sbk00300  Lysine biosynthesis
sbk00550  Peptidoglycan biosynthesis
sbk01100  Metabolic pathways
sbk01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sbk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SHEWBE_0175 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SHEWBE_0175 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    SHEWBE_0175 (murF)
Enzymes [BR:sbk01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     SHEWBE_0175 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: SQH74171
UniProt: A0A330LWB1
Position
SHEWBE:complement(164291..165658)
AA seq 455 aa
MIPLSLSGICQRLNARLVGADGEFRHVSSDSRVIPAHTLFVALKGEKFDGHNFANMAVEN
GATALLVDHELPLNIAQLIVKDTQKAMGELGAYLRELIQPKSVALTGSNGKTSVKEMVAT
ILSQRHKVLYTAGNFNNEIGVPLTLLRLEADDEFGVFELGANHQGEIDYTSSLVKPDVAL
VNNVASAHLEGFGSLAGVACAKSEIFNHLAATGTAVINADDQFASVMMSASMGFTQLTFG
VESEADIQASDLEADSVGCYRFKLSYRQESVLIALPLSGRHQVSNALAATAICLSFGLTL
DEIKLGLSLLLPIKGRMLPTQLGRVRVIDDSYNANPASVTAAIDWLQEIEGHRCLVLGDL
GELGDNASLLHTELGELTKQRGLDSLFTLGELSANASRAFGVDGYISLECLVEDLIKNIK
QLQGDVTVLVKGSRSAKMERVVEALILAYGRGEFV
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgatcccattgagcttgtcgggtatatgtcagcgcttgaatgccaggttagtgggcgcc
gacggtgagtttcgtcatgtttccagtgacagtcgagttatccctgcgcacactcttttt
gtcgccttgaaaggcgagaaattcgatggacataattttgccaacatggcagtggaaaat
ggcgcaacagccttgttggtcgaccatgaattgccactgaacattgcgcaactgattgtt
aaagatacccagaaggcgatgggagagctgggtgcttatctaagagagcttattcagcca
aaatctgtcgcgttaaccggctcaaatggcaagaccagtgttaaggagatggtggcgacc
atcttatctcaaagacacaaggtgttgtacaccgcaggtaacttcaataatgaaattggc
gtgcctttgacactcttacgcttagaggccgatgatgaatttggcgtgttcgagttaggt
gcaaatcaccagggagagatagattacacctcttccttggtcaagcctgatgtggcctta
gtcaacaatgtggcgtcggcgcacctggagggttttggttctcttgcgggcgttgcctgt
gcaaagtctgaaatatttaatcatttagccgcgactgggacggccgttatcaatgcagac
gatcagtttgcgtcagtaatgatgtcggcatctatgggttttactcagttgacgtttgga
gtcgagtcagaagccgatattcaagcatctgatcttgaagccgattctgtggggtgttac
cgcttcaaattgagttacaggcaagagtccgttttgatagctctgccactatctggacgt
catcaggtgagcaatgccctagccgctacggccatctgtttatcttttggattaacgcta
gatgaaataaaattaggcttgtcacttctgctgcctatcaaaggtagaatgctgcccact
caattggggcgggtccgtgtgatcgatgatagctataacgccaaccctgcttctgtcacc
gctgcaatcgactggcttcaagaaattgaaggtcatcgttgtttagtgctgggtgatttg
ggcgaattgggtgacaatgcgtcccttttgcatactgaactaggcgaactgacaaaacaa
agaggtctggattcgctatttaccttaggtgagctcagtgctaatgcgagtcgtgccttc
ggcgtcgatggttatattagcctcgaatgtttggtagaagatttaataaaaaatattaag
cagttgcaaggtgatgtcactgttttggtcaaaggatcacgtagcgccaaaatggagcgc
gtggtcgaagctttaatacttgcctacgggcgcggggagtttgtttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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