KEGG   Sphaerochaeta globosa: SpiBuddy_1390
Entry
SpiBuddy_1390     CDS       T01439                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sbu  Sphaerochaeta globosa
Pathway
sbu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SpiBuddy_1390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbu03019]
    SpiBuddy_1390
   03016 Transfer RNA biogenesis [BR:sbu03016]
    SpiBuddy_1390
Enzymes [BR:sbu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SpiBuddy_1390
Messenger RNA biogenesis [BR:sbu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SpiBuddy_1390
Transfer RNA biogenesis [BR:sbu03016]
 Prokaryotic type
  tRNA degradation factors
   SpiBuddy_1390
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KhpA-B_KH KH_2 aRib
Other DBs
NCBI-ProteinID: ADY13215
UniProt: F0RZ08
Position
complement(1506198..1508306)
AA seq 702 aa
MEVKKVSVRIGDADLVFETGKIAKQTSGTVYAHYEGSAVIATVCCGKEPNEALDYVPLSV
EYNEKYYAAGKIPGGFLKREARPKDKEILVSRLIDRPMRPLFDKAFGREIQVVPTVVSSD
MNNTPDIIAINAASAAVTISDIPFNGPIAAVRISMVDGAYVVNPTFSQIERSSLDIVVAG
TRDGITMVEGGAKEVSEEVMLEAIATAQPYITKLCDAQLELKKIAGKEKLPVVTLTVDLS
WLAPVREYAYPLIKQASFVKGKMERYAALAKVQGEVKEKFQDVIAEDSKRDGQLSSLFED
LEYEILRASILNDGKRTDGRSVDQIRPITCEVGLLDRTHGSALFTRGETQALAVTTLGTA
SDEQMFDTIDGEKSFSSFMLHYNFPPYSVGECGRLSTGRREIGHGHLAQRALEAIVPNKE
SFPYTVRVVSEIMESNGSSSMASVCGGCLSLMDAGVPIKKPVAGIAMGLITEGADYSKYV
VLSDILGEEDHLGDMDFKVAGSRDGITAFQMDIKIAGVTPEIMKKALEQAKQGRMHILSI
MEGALSNSREEISEYAPKILTMKVDEEKIGAVIGTGGKTIKAIASQSGAEVNIADDGTVT
IYGRDNASAQLAKELVKSIVEEPEVGRIYEGTVKRIMDFGAFIEILPGKEGLCHISKLAK
TRVQNVEDVLKVGQVVPVKLIEIDRQNRLNLSYIDAIETQSK
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggaagtaaaaaaagtttctgtacggatcggcgatgccgacctggtgtttgaaaccggg
aaaatcgccaagcagaccagtggtactgtgtacgcccattatgagggtagtgctgttatt
gcaactgtctgctgcggaaaggagcccaacgaggctctggattatgtacccctgagtgtt
gaatataatgagaaatattatgccgcaggcaaaatcccaggcggattcctcaaacgagaa
gcccgccccaaggataaggaaattctggtaagtaggctcatcgaccgcccgatgcgcccc
ctctttgacaaggccttcggccgtgaaatccaggtggttcccactgttgtatcttccgat
atgaacaacacccctgacatcatcgccattaacgctgccagcgctgcagtaactatcagt
gacatccccttcaacgggcctattgctgctgttcgtatctccatggtggacggtgcctat
gtcgtcaaccctaccttcagtcaaatcgagcgttccagcttggacatcgttgttgcagga
actcgtgatggtattaccatggtcgagggtggtgctaaggaagtaagcgaagaagtgatg
cttgaagccattgctaccgcccagccgtacatcaccaagctttgcgatgcacagcttgag
ctgaaaaagattgctggcaaggaaaagcttccggtagtaacgttgacggttgacctctcc
tggctcgctcctgtccgtgagtatgcctatcccctcatcaagcaagcttcctttgtaaaa
ggtaagatggagcggtatgccgcccttgcgaaggtacagggtgaagtcaaggagaagttc
caggacgtaatcgctgaagattccaaacgcgatgggcaactctcatccctgttcgaggat
ctcgagtacgaaattcttcgcgcttcaattctcaatgacggcaagagaaccgatggtcga
tctgttgaccagatcagacccatcacttgtgaagttggattgttggacaggacccatggt
tctgcactttttacccgcggtgagacacaagctttggctgttaccacactcggtactgcc
agcgacgagcagatgttcgataccatcgacggcgagaagagcttcagttccttcatgctt
cactataacttccctccgtatagcgtaggcgagtgtggaaggctgagcaccggtcgtcgt
gagatcggccacggtcatttggcacagcgtgctcttgaagcaatcgtccccaacaaggag
tcattcccctatacagtgcgtgtagtcagcgagattatggaatccaatggttcctcctcc
atggcttcagtctgtggtggttgtctctcgttgatggatgccggtgttcccattaagaag
ccggtagctggtattgccatgggtttgattaccgaaggtgctgattactccaagtatgtc
gtgcttagcgacatcctcggtgaagaagaccacctcggcgatatggacttcaaggtagcc
ggtagccgcgatggtattaccgcattccagatggacatcaagattgcaggggtaacacct
gaaatcatgaagaaggctcttgagcaggctaaacaaggcagaatgcacattctttccatc
atggaaggagcactgagcaactcacgtgaggaaatcagtgaatatgctcccaagattctc
accatgaaagtggacgaagagaaaatcggggcagtcatcggaaccggtggaaagacgatc
aaggccattgccagccagagtggagctgaggtcaacatcgccgacgacggaaccgttacc
atctatggtagagacaatgcatcagcccagctggctaaggaactggtaaaatccattgtt
gaggaaccggaagtaggccgcatctatgaaggtacggtaaagcgcatcatggatttcggt
gcctttattgaaatcctgcctggaaaggaagggctctgccatatttccaagcttgcaaag
acacgtgtccagaatgttgaggatgtactgaaagttggtcaggtagttccggttaagctc
attgaaattgaccgtcagaaccgcttgaacctcagttacatcgatgcaatcgagactcag
tcgaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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