KEGG   Salmonella bongori N268-08: A464_438
Entry
A464_438          CDS       T02733                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sbz  Salmonella bongori N268-08
Pathway
sbz03030  DNA replication
sbz03430  Mismatch repair
sbz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sbz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A464_438
   03430 Mismatch repair
    A464_438
   03440 Homologous recombination
    A464_438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sbz03032]
    A464_438
   03400 DNA repair and recombination proteins [BR:sbz03400]
    A464_438
Enzymes [BR:sbz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A464_438
DNA replication proteins [BR:sbz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A464_438
DNA repair and recombination proteins [BR:sbz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A464_438
SSDB
Motif
Pfam: DNA_pol3_tau_5 DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_4 AAA AAA_22 AAA_5 RuvB_N AAA_18 AAA_30 AAA_2 AAA_14 DNA_pol3_delta AAA_16 ResIII AAA_7 AAA_assoc_2 nSTAND3 PIF1 TsaE B12-binding_2
Other DBs
NCBI-ProteinID: AGR57624
UniProt: S5MSK1
Position
464220..466082
AA seq 620 aa
MLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE
QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTL
EEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILDEEHIVHEPRAL
QLLSRAADGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAVVDADGER
VMALVNEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGSDMAAIEQRMRELARTVSPG
DIQLYYQTLLIGRKELPWAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAV
MTPMQVPQQPVAQQPPAAPVGLSESTSQVLAARNQLQRAQGATKAKKSEPAAAFRARPVN
NAALERLASVSERVQARPAPSALEKAPAKKEAYRWKATTPVVQTKDVVATPKALKKALEH
EKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEENGNVVCLHLRSTQRHL
NSSGAQQKLAQALSELTGSPVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNN
IQALRRFFDAELDEESIRPI
NT seq 1863 nt   +upstreamnt  +downstreamnt
gtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcacgcgtatcttttt
tccggcacgcgcggcgtcgggaaaacgtctatcgcccgactgctggcgaagggattgaac
tgcgaaacgggcatcaccgccacaccctgcggcgtctgcgataactgccgcgaaatcgag
cagggacgctttgtcgatctgattgagattgacgctgcctcgcgcacgaaagtggaagat
acccgcgatctgctggataacgtccagtacgcgcctgcgcgcgggcgttttaaggtctat
ttgatcgacgaagtacatatgttgtcgcgccacagttttaacgcgctgcttaaaacgctt
gaagagccgcccgcgcacgtgaagtttttactggcaaccaccgatccgcagaagctaccg
gtgaccattttgtctcgctgcctgcaatttcatctcaaggcgctggacgttgaacagatt
cgccatcagcttgagcatattcttgatgaagaacatatcgttcacgaacctcgcgcgttg
caactgttatcacgggcggctgacggcagtttgcgcgatgcgctaagtttgactgaccag
gctatcgccagcggcgacggacaggtctcaacacaagcagtaagcgcgatgctcggcaca
ctggacgacgaccaggcgctgtcattagtggaagcggtagttgacgccgatggcgaacgt
gttatggcgcttgtcaatgaggcggcggcgcgcggtatcgaatgggaagcgctactcgtc
gaaatgcttggcctgctgcaccgtattgcgatggtacaactttcgcctgctgcgttaggc
agcgatatggcggccattgaacaacgaatgcgcgagcttgcccggacggtgtctccaggc
gacatccagctttattaccagacgttgctgattggccgtaaagaattgccctgggcgcca
gataggcgtatgggcgttgaaatgacattactgcgtgcgctggcgtttcacccgcgtatg
ccgttaccggaaccggaagtccccagacaatcttttgcgcctgttgcgccaacggcggtg
atgacgccgatgcaggtgccgcagcagcccgtggctcaacagccgccggcggcgcccgtt
ggattgtcggagagcaccagccaggtactggcggcgcgtaatcagttgcagcgcgcgcag
ggagcaaccaaagcaaaaaagagtgaaccggcagccgcattccgcgcgcggccggtgaat
aacgctgcgctggagcggctggcctccgtatcggaacgcgtacaggcacgtcctgcaccg
agcgcgctggaaaaggcgccagcgaagaaagaggcgtatcgctggaaggcgacaacccca
gtggtgcagaccaaagacgttgttgcgacgccaaaagcgctaaaaaaagcgctggagcat
gaaaaaacgccggagctggcggcaaaattggcggccgaagcgattgagcgcgatccgtgg
gcggcgcaggtaagccagttgtctctgcctaagctggtggagcaggtggcgttaaatgcg
tggaaagaagagaacggcaatgtcgtctgtctgcacctacgctcaactcagcggcatctg
aattccagtggcgcgcagcagaagctggcgcaggcgctgagcgaattaaccggttcaccg
gttgaactgactatcgttgaagatgataatccggcggtgcgtacgccgctggaatggcgt
caggctatttacgaagagaagcttgcgcaggcgcgcgagtcgattatcgcggataataac
attcaggcgttgcgtcggtttttcgacgccgaactggatgaagagagtatccgccccatt
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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