KEGG   Staphylococcus caprae: DWB96_08035
Entry
DWB96_08035       CDS       T06252                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
scar  Staphylococcus caprae
Brite
KEGG Orthology (KO) [BR:scar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scar03016]
    DWB96_08035
Enzymes [BR:scar01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DWB96_08035
Transfer RNA biogenesis [BR:scar03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DWB96_08035
 Prokaryotic type
    DWB96_08035
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QDW94164
Position
complement(1685406..1686323)
AA seq 305 aa
MYNGILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGHATRISDYV
MDMGKTYKATVTLGMSTTTEDQTGDILETKRIKAEDVSEQDIDHTLEQFLGLIKQIPPMY
SSVKVKGKKLYEYARNNEEVERPIRHVYIKSIQRISELTFEGEQCHFDIEVTCGKGTYIR
TLATDIGASLGFPAHMSLLTRIASGGFKQEASLTLDQIKVLHEHDSLQEKLFPIEYGLKG
LQHIEVSDDELKKRILNGQKFNSHEFQYEFEEQFVFIDNHTNKALAIYMIHPEKAHEIKP
KKVFN
NT seq 918 nt   +upstreamnt  +downstreamnt
atgtataacggtatattacctgtatttaaagaaagaggtttaacaagccacgatgttgtt
tttaaactaagaaagattttaaaaatgaagaaaattggacatacgggtacacttgatcct
gaagtaaatggtgtacttccaatttgtttaggtcatgctacgaggatcagtgattacgtg
atggatatgggtaaaacgtataaagcaactgtcacactaggcatgagtacgactactgaa
gatcaaacaggggatatattagaaactaagcgtattaaagcagaagatgtttcagaacaa
gacatagatcatacgcttgagcaatttttaggtcttataaaacaaattccccctatgtat
tcttcagtgaaggttaaaggtaaaaagctatacgaatatgctcgaaataatgaggaagta
gaaagaccaatcaggcacgtctatatcaaatctattcaaagaatttctgaactaaccttc
gaaggtgaacagtgtcatttcgatattgaagttacatgtggtaagggtacgtatattaga
actttagctactgatattggtgccagtcttggctttcctgcgcatatgtcacttttaact
cgcatcgcttcaggcggttttaagcaagaggccagtttaacacttgatcaaattaaagta
ttgcatgagcatgattcattacaagaaaagttgtttcctatagaatatggtttgaaagga
ttacaacacattgaagtcagtgatgatgaactcaagaagcggatcttaaatggtcagaaa
ttcaatagtcatgaatttcagtatgaatttgaggagcaatttgtgtttatcgataaccac
acaaataaagcgcttgctatatatatgattcatccggaaaaagcgcacgaaattaaaccg
aaaaaagtttttaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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