KEGG   Saccharomyces cerevisiae (budding yeast): YAR003W
Entry
YAR003W           CDS       T00005                                 
Symbol
SWD1, CPS50, FUN16, SAF49
Name
(RefSeq) COMPASS subunit protein SWD1
  KO
K14961  COMPASS component SWD1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sce03036]
    YAR003W (SWD1)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     YAR003W (SWD1)
    COMPASS/SET1 complex (yeast)
     YAR003W (SWD1)
    MLL-HCF complex
     YAR003W (SWD1)
    MLL3/MLL4 complex
     YAR003W (SWD1)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd WDR55 ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_Vps41 eIF2A Beta-prop_LRRK2 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Frtz Beta-prop_VPS8 PD40 PilM
Other DBs
NCBI-GeneID: 851265
NCBI-ProteinID: NP_009403
SGD: S000000064
UniProt: P39706
Structure
Position
I:155005..156285
AA seq 426 aa
MNILLQDPFAVLKEHPEKLTHTIENPLRTECLQFSPCGDYLALGCANGALVIYDMDTFRP
ICVPGNMLGAHVRPITSIAWSPDGRLLLTSSRDWSIKLWDLSKPSKPLKEIRFDSPIWGC
QWLDAKRRLCVATIFEESDAYVIDFSNDPVASLLSKSDEKQLSSTPDHGYVLVCTVHTKH
PNIIIVGTSKGWLDFYKFHSLYQTECIHSLKITSSNIKHLIVSQNGERLAINCSDRTIRQ
YEISIDDENSAVELTLEHKYQDVINKLQWNCILFSNNTAEYLVASTHGSSAHELYIWETT
SGTLVRVLEGAEEELIDINWDFYSMSIVSNGFESGNVYVWSVVIPPKWSALAPDFEEVEE
NVDYLEKEDEFDEVDEAEQQQGLEQEEEIAIDLRTREQYDVRGNNLLVERFTIPTDYTRI
IKMQSS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgaacatccttttacaggatccattcgctgttcttaaggaacatcctgagaagctcaca
catacgattgagaaccctttacgcactgaatgtctccagttcagtccttgcggtgattac
ctggctcttgggtgtgccaatggagcacttgttatttacgatatggatacgttcaggcct
atttgtgtcccaggaaatatgttgggagcacatgttcgacccattacatctatcgcatgg
tctccagatggtagattgttgcttacaagctctagagactggtcaataaaactgtgggat
ctttcaaagccaagtaagcctttgaaagaaatacgattcgattctccaatttggggttgc
caatggctggatgctaaaaggcggctttgtgtagctacgatatttgaggaaagtgacgca
tatgttattgacttcagcaatgatccggtcgcaagccttctcagtaaatcagacgaaaaa
caattgagttcgacacctgatcatggatatgttcttgtttgtacagtacataccaaacat
ccaaatattattattgttggaacttcaaaaggttggctagacttctataaattccattct
ctatatcaaacagaatgtattcattcccttaaaatcacgagttctaatatcaaacattta
attgtctcgcaaaatggtgaaagattagctattaactgctccgatagaacaataagacaa
tacgaaataagtattgatgatgaaaactctgcggttgagttgaccttagagcataagtac
caggatgtgattaataaattacagtggaactgtatcctctttagtaataatactgccgaa
tacttagtcgcttctacacatggttcttctgcacatgaactatacatctgggaaacgact
agtggaacgttggtgagagtcctggaaggggctgaagaggagttgatagatataaattgg
gacttctatagtatgagtatagtgagtaatggttttgaatctgggaacgtgtatgtgtgg
tctgttgttattccgccaaagtggagtgctttggcgccagattttgaagaagtagaagag
aatgtcgactatttggagaaggaagatgaatttgatgaggtcgatgaggcagaacagcag
caaggactagaacaagaggaagaaatagctatcgatcttcggacgagagagcaatatgat
gttagaggtaataacttgcttgtagaacggttcacaatccctacagattatacgaggata
attaagatgcagtcatcatag

  All links  
Gene (22)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (29)   
   Pfam (29)   
All databases (57)   

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