KEGG   Saccharomyces cerevisiae (budding yeast): YJR119C
Entry
YJR119C           CDS       T00005                                 
Symbol
JHD2, KDM5
Name
(RefSeq) histone demethylase
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sce01009]
    YJR119C (JHD2)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sce03036]
    YJR119C (JHD2)
Enzymes [BR:sce01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     YJR119C (JHD2)
Protein phosphatases and associated proteins [BR:sce01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     YJR119C (JHD2)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    YJR119C (JHD2)
SSDB
Motif
Pfam: JmjC PHD JmjN zf-HC5HC2H KDM5_C-hel Molybdop_Fe4S4 Prim_Zn_Ribbon ASH2L-like_WH
Other DBs
NCBI-GeneID: 853583
NCBI-ProteinID: NP_012653
SGD: S000003880
UniProt: P47156
Position
X:complement(644304..646490)
AA seq 728 aa
MEEIPALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKVVPPNGFCPPLSIDMENFTFQPR
IQNLENLDLKNRCRLFFMKQLNNFKRSVKDPSKLILREPYTIVEYSDSTHASEILKKKVY
FYDVFSELIKDNRTLTDTTQSFRRKLKFRDISQLRGDISLWRTISKKFNVPIGLLKEIFE
KYIASYYIFLHSLNENVHTALHADQYPKSLLSDDEDDFDLGPDSNSGSDFEEDDDDACIV
CRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTCIVGNGYYGFTQDTHDYSL
PEFQEYCKRQNSRLLPARKLSIDELEEMFWSLVTKNRRSSLTTVKYGADIHNELPGQITG
FPTREFIPKNINGDELIDYLKYCDHPMNLTNLPMAHNSLLPLFKRNISGMTIPWIYIGSL
FSTFCWHMEDQYTLSANYQHEGDPKVWYSIPESGCTKFNDLLNDMSPDLFIKQPDLLHQL
VTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWLPY
GFGAITDYKLTQKACVFDMFDLMINVLDKYNKDTLLFNDAFVRQCYSSLIVFYNTELKRI
RKIQAIVPRTTLLEVHTDPNDEDEEYDIFCSQCKTICSIAFVLRKNNYDSIRTYKRHKKN
HLSIRQWNELSTTDSKVSILCTQDYLKSIQNLNNSDGEEPYIDDELYFTKSLKDIDSLIK
QVGVKLDR
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggaggaaattcctgccctgtatccaacggaacaagaattcaaaaatccgatcgattat
ctctctaacccccacattaaaaggcttggtgtacgatatggtatggtcaaggtcgtacca
ccaaacgggttctgcccgccactttctattgatatggaaaattttacttttcaaccaaga
attcaaaatctggagaacctagacctgaaaaataggtgtaggctattttttatgaaacag
ttaaataattttaaaagatccgttaaggatccatcgaaacttatacttagggaaccttat
acgattgtagaatattcagattctactcatgcatcggaaatactaaaaaaaaaagtgtac
ttttatgacgttttctctgaactaataaaagacaatcggacacttactgacactacacag
tcattcaggcgaaaattgaaatttagagatatttcccaattaagaggcgacatcagtcta
tggaggaccatttctaaaaaattcaacgtaccaatcggcttgttaaaggaaatttttgag
aaatatattgcctcatactacatatttcttcattcactgaacgagaacgtgcacacggcg
ctgcatgctgaccagtatccaaaatccttattaagtgatgacgaggacgatttcgatctt
gggccagattcgaattctgggtcggattttgaggaggacgatgatgatgcttgtattgtt
tgtcgcaagacaaatgatccaaaaagaacaattttatgtgattcatgtgacaaaccattc
catatatattgtttatcaccacctttggaacgtgttccctctggcgattggatttgtaac
acttgtatcgtcggaaacggatattacggattcactcaggacacgcatgactattctcta
ccagagtttcaagaatattgtaaacgtcaaaattcaaggttattaccagcacgaaaactg
tctatagatgagttggaagagatgttttggagcttagtgaccaagaatcgtcgcagttca
ttaacgacagttaaatacggtgctgacatacataacgaattgccaggtcaaattaccggc
tttccgacgagagaatttatacccaaaaatataaatggggacgaattgatagactacctc
aaatattgcgatcatcctatgaatttaactaacttgcctatggctcataattcgctatta
ccgttatttaaaagaaatatttctggcatgactattccttggatttacataggctcctta
ttttccacattttgttggcatatggaagatcagtataccctaagtgctaactatcaacat
gaaggtgaccctaaggtctggtacagcattcccgaatcgggatgtacgaaattcaacgat
ctattaaatgatatgtcaccagacttatttatcaaacaaccagacctactgcatcagcta
gtgactttaatatctccgtacgatccaaatttcaagaaatcaggtattcctgtgtacaaa
gctgtgcaaaagcccaacgaatatattatcacgtttcctaaatgttaccatgctggtttt
aatacaggttataattttaatgaagctgtcaattttactatagatttctggctaccatat
ggatttggtgcgattacggattataaattaactcagaaagcatgtgtttttgatatgttt
gatttaatgatcaatgttttggacaagtacaataaagatactctattgttcaatgatgct
tttgttaggcaatgttactcttcattgatcgtcttttataatactgaattaaaacgcata
cggaaaattcaggccattgtaccacggacaactcttttggaggtgcatactgatccaaac
gatgaagatgaggaatacgatatattttgttcccaatgtaagactatatgttcaatagcc
tttgtattgcgaaagaataactatgattcaattagaacgtataaaagacacaagaaaaac
catttaagtattaggcagtggaatgaactatccacgacggacagtaaagtgagtatcctg
tgtacgcaggattacttaaaatcaatacaaaacttgaacaatagcgacggtgaagaacct
tatattgacgatgaattgtatttcactaagtctttgaaggatattgactctttaataaag
caagttggtgttaagttagatagatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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