KEGG   Sphingobium chlorophenolicum: Sphch_2643
Entry
Sphch_2643        CDS       T01522                                 
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
  KO
K10943  two-component system, response regulator FlrC
Organism
sch  Sphingobium chlorophenolicum
Pathway
sch02020  Two-component system
sch02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Sphch_2643
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Sphch_2643
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sch02022]
    Sphch_2643
   02035 Bacterial motility proteins [BR:sch02035]
    Sphch_2643
Two-component system [BR:sch02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   Sphch_2643
Bacterial motility proteins [BR:sch02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    Sphch_2643
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_3 HTH_28 MCM Mg_chelatase AAA AAA_19 AAA_2 HTH_1 MerR AAA_7
Other DBs
NCBI-ProteinID: AEG50288
UniProt: F6F064
Position
1:2809273..2810541
AA seq 422 aa
MSSLDVSRGVCALVPGLQHWLENAFYSVRIVDAQSPRERNDRRILLATEIGHATHRDILI
NMVDGAPSLVPAANGLPARVAFGLEDMGFAFALIAELARPAAVPAVGDNASTRLMTLAGR
VARSDATVLIQGDTGTGKEGMARFLHAQSGRVTRDFIAVNCAALPETMMEAMLFGHKKGS
FTGAANASEGLFLAADGGTLFLDEIAELPLALQAKLLRALQEGEVLPVGATHPVPVNVRI
VAACNRNLAAEVAAGRFREDLYWRLNVMPLELRPLAERPGDVTAIAAAMLLRMSDVAKDA
FVWPTAAALEKLTAHVWPGNARELGNVLQRAVVLRDGDRIEPADLHITGAPQLRIVEQVL
APADPIRLSPTSLRDVAHHSKLEAVRVALRETDGHRAAAAAKLGISERTLRYRLAEMREL
AA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcatctctggacgtgagccgaggagtctgcgcgctcgttccgggcctgcagcactgg
ctggaaaatgcgttctattcggtgcgcatcgtggatgcgcaaagcccgcgggagcggaat
gaccgccggatcttgctggcgaccgagatcggccatgccacccatcgcgatatcctgatc
aacatggtcgacggcgcgccttcgctggtgcccgccgccaacggcctgcccgcccgcgtg
gcgttcgggctggaggatatgggcttcgccttcgcgctgatcgcggaactggcccgcccg
gccgccgttccggcggtgggcgacaatgccagcacccgcctgatgacgctggccggccgc
gtcgcccgcagcgacgccaccgtgctgatccagggcgacaccggcaccggcaaggaaggc
atggcgcgcttcctgcacgcccagtcgggccgcgtgacccgcgacttcatcgccgtcaac
tgcgcggcgctgcccgaaacgatgatggaagccatgctcttcggtcacaagaagggcagc
ttcaccggcgcggccaatgcgtcggaagggctgttcctcgcggccgacggcggcaccttg
ttcctggacgagatcgcggaactgccgctggcgctccaggcgaagctgttgcgcgccctt
caggaaggggaagtgctgcccgtgggcgcgactcaccccgttcccgtcaatgtccgcatc
gtcgcggcctgcaaccgcaacctcgccgccgaagtcgccgccgggcgcttccgcgaggat
ctttactggcggctcaacgtcatgccgttggaactgcgcccgctggccgagcgtccgggc
gatgtgaccgccatcgccgccgccatgctgctgcgcatgtcggacgtggcgaaggacgcc
ttcgtctggccgaccgccgccgcgctggaaaagctgaccgcccatgtctggcccggcaat
gctcgcgaactgggtaatgtgctgcaacgcgccgtcgtcctgcgcgacggcgaccggatc
gagcctgccgacctgcacatcaccggcgcgccgcagcttcgcatcgtggagcaggtgctg
gcgcccgccgatccgatccgcctgagcccgaccagcctgcgcgacgtggcccatcattcg
aagctggaggctgtccgcgtcgcgctgcgcgagacggacggccaccgcgccgccgccgcc
gccaagctgggcatttccgaacgtacgttacgctatcggctcgccgagatgcgcgaactc
gcggcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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