KEGG   Streptomyces collinus: B446_26190
Entry
B446_26190        CDS       T02787                                 
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sci  Streptomyces collinus
Pathway
sci03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B446_26190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sci03400]
    B446_26190
Enzymes [BR:sci01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     B446_26190
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     B446_26190
DNA repair and recombination proteins [BR:sci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     B446_26190
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Auto_anti-p27 DZR NFACT_N Zn_ribbon_recom
Other DBs
NCBI-ProteinID: AGS72046
UniProt: S5V2C6
Position
6029769..6030629
AA seq 286 aa
MPELPEVEVVRRGLERWVAHRTVADVEVLHPRAVRRHVAGADDFAHRLKGHHIGTPSRRG
KYLWLPLEETNQSVLAHLGMSGQLLVQQHQAPDEKHLRIRVRFADGLGTELRFVDQRTFG
GLSLHDNTPDGLPDVIAHIARDPLDPLFDDEAFAVALRRKRTTVKRALLDQSLISGVGNI
YADEALWRARIHYERPTANLTRPVTAELLGHVRDVMNAALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCRRCGTPMRRRPWMNRSSYFCPKCQRPPRVPS
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcctgagttgcccgaggtcgaggtcgtccggcgcggcctggagcggtgggtcgcccac
cgcacggtcgcggacgtcgaggtgctgcacccgcgcgcggtgcgccggcacgtcgccggc
gccgacgacttcgcgcaccgtctcaagggtcaccacatcggcacgcccagccggcgcggc
aagtacctgtggctgccgctggaggagaccaaccagtccgtcctggcccacctgggcatg
agcggccagctgctggtgcagcagcaccaggcgccggacgagaagcacctgcgcatccgg
gtccggttcgccgacggcctcggcaccgagctgcgcttcgtggaccagcgcaccttcggc
ggcctgtcgctgcacgacaacacccccgacggcctgcccgacgtcatcgcgcacatcgcc
cgcgaccccctggacccgctgttcgacgacgaggcgttcgccgtcgcgctgcgccgcaag
cggaccaccgtcaagcgggccctgctcgaccagtcgctgatcagcggggtcggcaacatc
tacgcggacgaggcgctgtggcgcgcgcgcatccactacgaacgcccgacggcgaacctc
acccgcccggtcacggccgaactgctcggacacgtccgggacgtgatgaacgcggcgctg
gccgtcggcggcaccagcttcgacagcctgtacgtcaacgtcaacggggagtcgggctac
ttcgaccggtccctggacgcgtacgggcgtgagggactgccgtgcaggcggtgcggtacg
ccgatgcggcgccggccgtggatgaaccggtccagctacttctgcccgaagtgtcagagg
ccgccgcgcgtcccgtcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system