KEGG   Seriola dumerili (greater amberjack): 111219470
Entry
111219470         CDS       T05606                                 
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
  KO
K15516  fragile X mental retardation protein
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111219470 (fxr1)
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     111219470 (fxr1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     111219470 (fxr1)
   mRNA cycle factors
    Stress granule specific factors
     111219470 (fxr1)
SSDB
Motif
Pfam: FXMRP1_C_core FXR_C1 KH_9 Tudor_FRX1 KH_1 Agenet FXR_C3 Tudor_2
Other DBs
NCBI-GeneID: 111219470
NCBI-ProteinID: XP_022597914
Position
Unknown
AA seq 695 aa
MEELAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRLPPPADAKKEIG
EGEEVEILSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNPNKA
ITKNSFHKCSVPVPQDLQEACQSENAHKDFKKAVGACRISYCPETSQLVIVSTNESTVKR
VSLLSDMHLRSIRTKLLLMSRNQEATKHLESSRQLVSSFQEEFMVRPDLMGLAIGSHGSN
IQQARKVPGVTAIELDEETGTFRIYGETAEAVKKARNYLEFLEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDTKQPRQELTQGMVPFTFVGTKESIGNVQVLLEYHISY
LNEVEQLRLERMQIDEQLRQITQGHRPADRERGERGERGGGYNTDSSANASSSSLHATRS
YNSRGRGRRGHSYSTGYGTNSEQSNASETDSERKDELSDWSLAGEDQDRERERGSRPQRD
GRRRPGPGRGRGGPGGRGRGGRGYSNSSAGPQDHEDNHAYAVLETNTETDQTADTDASES
NLPANRRRRSRRRRTDEDATLMDGMSESDNASMSENGIDDSEAKPQRRNRSRRRRIRLPE
ERQPVTVADYISRAESQSRQMTTNEPKKNMDVGQVEAIAEHSPQPAPATTNGSNNNAADS
EGSDAAGAPRSSTERPAKVSYKEDSNPQTVVNGLS
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggaagaactggcggtggaggtccgtggctccaacggggcttattacaagggctttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagaacgc
caggtgcccttcagtgatgtcaggttgccaccgcctgctgacgccaagaaagagattgga
gagggcgaggaggtggagatcctctccagagccaatgaacaggagccttgtggttggtgg
ctggctaaagttcgcatgatgaagggagatttctatgtgattgagtacgcggcctgcgat
gccacctacaatgagatagtgacctttgagcgcctgcgtccagtaaaccccaacaaggcc
atcaccaagaattcctttcacaagtgctctgtccctgttcctcaggatctacaagaagcg
tgccagagtgagaacgcccataaggacttcaagaaagctgtgggagcctgtcgcatctca
tactgccccgagaccagccaactagtgattgtgtccaccaatgagtcaacagtgaagcgt
gtgtctttgctgagtgacatgcacctgcgcagcatcaggaccaagctgctgctaatgtca
cgcaaccaggaggctacaaaacacctggagagctctaggcagctggtgtcatccttccag
gaggagttcatggtaagaccggatctgatgggcctggccatcggcagccacggcagcaac
atccaacaagctcggaaagttccaggtgtcactgccattgagctggatgaggagactggc
actttcaggatttatggagagacagcagaggcagtaaagaaggccagaaactacctggag
tttctggaggattctgtccaggtgccaaggaacctcgttggcaaagtgatcggtaagaat
ggtaaggtcatccaggagattgtggacaagtctggagttgtgagggtcaggatagaagga
gacaatgacaccaagcagccccgacaggaattgacacagggaatggtccccttcaccttt
gtcggtactaaggagagcattggcaatgttcaggttttgctggagtaccacatctcttac
ctcaatgaggttgagcaacttcgtctggagcggatgcagatcgacgaacagttacgtcag
atcacccagggtcaccgaccagctgacagggagagaggagagaggggcgagagaggagga
gggtataatacagacagcagtgccaatgcctcctcatcctccttacatgccactcgctcg
tacaacagtcgcggccgtgggcgcagaggacacagctacagcactggatatggcaccaac
tcagagcagtctaacgcctctgagactgattcagagcgtaaggatgaactcagtgactgg
tccctggctggagaggaccaggacagggagagggagagaggctctaggccacagagagat
ggtcgcaggaggccaggacccggcagaggccgcggagggcctggaggaaggggaagagga
ggaagaggatacagcaatagttctgcggggcctcaggaccacgaggataaccatgcctat
gcagtcttggagacaaacacggagacagaccagacagccgacactgatgctagcgagtcc
aacttgcctgcaaaccgccgcagaaggtctcggcgacgcagaacagatgaggacgccaca
ctgatggatggcatgagcgagtctgacaacgcctcaatgagtgaaaatggaatagatgac
tcggaagctaaacctcagcgtcgtaaccgtagtcgacgtcgccgcatccgcctgcctgag
gagaggcagccagtgactgtggctgattacatatccagggccgaatctcagagcaggcag
atgaccaccaacgaacccaagaagaacatggatgtgggtcaggtggaagccatcgctgag
cacagcccgcaacctgccccggcaaccaccaatggttccaacaacaatgccgccgacagt
gagggcagcgatgccgccggagctcccaggtcttccaccgagaggcctgccaaagtctcc
tacaaggaggactcaaacccgcagactgttgttaatggactttcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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