KEGG   Seriola dumerili (greater amberjack): 111238719
Entry
111238719         CDS       T05606                                 
Symbol
psmc1
Name
(RefSeq) 26S proteasome regulatory subunit 4
  KO
K03062  26S proteasome regulatory subunit T2
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03050  Proteasome
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    111238719 (psmc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sdu03051]
    111238719 (psmc1)
Proteasome [BR:sdu03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     111238719 (psmc1)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_2 AAA_22 nSTAND3 DUF815 AAA_5 RuvB_N AAA_16 AAA_25 AAA_28 AAA_14 AAA_3 RNA_helicase ATPase IstB_IS21 TIP49 AAA_11 AAA_18 Mg_chelatase Prot_ATP_ID_OB_N NB-ARC AAA_33 AAA_7 Parvo_NS1 PhoH NACHT AAA_24 AAA_30 TsaE
Other DBs
NCBI-GeneID: 111238719
NCBI-ProteinID: XP_022624098
Position
Unknown
AA seq 440 aa
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgggtcaaagccagagtggaggccacggtccagggggaggcaagaaggatgacaaggat
aagaaaaagaagtatgagcctccaattcccactagagttggtaagaagaagaagaagacc
aagggaccagatgccgccagcaaactaccattggtcacccctcacactcaatgccgcctt
aagctgctgaagcaggagcgaatcaaagactacctactgatggaggaggagtttatcagg
aaccaggagcagatgaaaccccttgaagagaaacaggaggaggagaggtcaaaggtagac
gacctgagagggactcccatgtctgtgggcaccctggaagaaatcattgatgacaaccac
gccatcgtttccacctcagtgggatcagagcactacgtcagcatcttgtcttttgtggat
aaggatctgcttgagccaggttgctctgtcctgctcaaccacaaggttcatgctgtgatt
ggggtgctgatggatgacactgatcccttggtgacagtgatgaaggtggagaaggcccca
caagaaacctacgctgacatcggtggactggacaatcagatccaggaaatcaaggagtcg
gtggagctgcctcttacacatccagagtattatgaggagatgggcattaagcctcctaaa
ggtgtcatcctgtatggcccacctggcacaggtaaaacgttgctcgctaaggccgtagcc
aatcagacatcagccaccttcctgcgtgtggtgggctcagagctgatccagaagtacctg
ggagacggacccaagctggtccgagagctcttcagggtggcagaggaacacgcaccctcc
atcgtcttcatcgatgagatcgacgccatcggcactaaaaggtatgactctaactctgga
ggtgagagggagatccagaggactatgttggagctgctcaaccagctggacggcttcgac
tcacggggagacgtgaaagttatcatggccaccaatcggatagaaaccctggacccagcc
ctcatcagacccgggagaatcgaccgaaagatcgagtttcctttgccggatgagaagacc
aagaggaggatcttccagatccacaccagccgcatgacagtagcagatgatgtcaccctt
gatgacctcatcctggctaaggacgacctatcaggagcagacatcaaggccatctgcaca
gaggccggcctcatggctttgcgagagcgccgtatgaaagtcaccaacgaagacttcaag
aagtccaaggaaaacgtcctgtacaagaagcaggagggcacaccagaggggctttacctt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (31)   
   Pfam (31)   
All databases (43)   

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