KEGG   Parasedimentitalea marina: EBB79_20625
Entry
EBB79_20625       CDS       T05780                                 
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
sedi  Parasedimentitalea marina
Pathway
sedi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EBB79_20625 (mutS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sedi03400]
    EBB79_20625 (mutS)
DNA repair and recombination proteins [BR:sedi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     EBB79_20625 (mutS)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29 AAA_22
Other DBs
NCBI-ProteinID: AZV80057
UniProt: A0A3T0N7S1
Position
4234028..4236664
AA seq 878 aa
MATVTPMMAQYLDIKAQYPDALLFYRMGDFYEMFFEDAVNAAEALDIALTKRGKHNGDDI
PMCGVPFHAAEGYLLTLIRKGFRVAVGEQLETPAEAKKRGGKSVVNRDVVRLVTPGTLTE
DSLLEARRHNFLVSYAEMRDQAALAWADISTGAFHVMPVARVRLSPELARLGPSELIVAD
GPAYDHIRPLADEYKIPVTPLGKASFDSTAAEKRICALFKVGALDGFGTFSRAEVSAMGA
LIDYLEITQKGKLPLLQVPEQEAEDRVMQIDAATRRNLELTRSLSGGRAGSLLSVIDRTV
TPGGGRLLEQRLSSPSRNLDVIHDRLAALDFAVNQSQLSEQLRDALRQSPDLDRALSRLA
LDRGGPRDLAAIRNGLTQAETIAALCQDLDLPNLIAGAIDNLQGFDDLLAMLDASLVAEP
PLLARDGGFIAAGYNDELDQARTLRDEGRSVIAAMQNQYAEHTGISSLKIKHNNVLGYFI
ETTATHADKMLSAPLSESYIHRQTTANQVRFTTVELSEIETKILNAGNQALEIEKRLYSE
VSGCILDLSARLNSAARGLAELDLLTGLADLAKGENWNRPKVDASRAFEISGGRHPVVEQ
ALRQQVGEVFIANDCDLTAADGAAIWLLTGPNMAGKSTFLRQNALIALLAQIGSYVPADT
AHIGVVSQLFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDG
LSIAWATLEHLHETNRSRALFATHYHELTQLAATLAGVDNATVTVKEWEGEVIFLHEVRK
GAADRSYGVQVAQLAGLPATVVARARDVLDMLEESSRDGAGSKIKIDDLPLFAAAPPPQP
AVPKGPSPLEEMLDSVHPDDLSPREALEMLYQLKNANQ
NT seq 2637 nt   +upstreamnt  +downstreamnt
ttggccacagtcacgccaatgatggcacaatatcttgacatcaaggcgcagtacccagac
gcgctgctgttctaccggatgggcgatttctacgagatgttctttgaggatgccgtgaat
gcggccgaggcattggatatcgcactgaccaaacgcggcaagcacaatggcgatgatatt
ccgatgtgcggagtgccatttcatgccgccgaggggtatttgctgacactgatccgtaaa
gggttccgtgtggccgtgggcgaacagttggaaactcctgcggaagccaagaagcgtggc
ggcaagtctgtggtcaaccgcgatgtggtgcgtttggttacacccggcacgctgaccgag
gattccctgctcgaggcacgtcggcacaattttctcgtttcctatgccgaaatgcgcgac
caggcggcattggcctgggcagatatttccactggtgcgtttcacgtgatgcccgtggcg
cgggtgcgtctgtcacccgaactggcccggctgggcccttctgaattgatcgtcgctgat
ggcccggcctatgatcatatccggcctttggctgatgagtacaaaattccagtgacacct
ttgggcaaggccagttttgacagtacggccgccgaaaagcgcatttgcgcgctgttcaag
gtcggtgccctggatggattcggtacattttcccgcgccgaggtttcggcgatgggtgcg
ttgatcgattatctggaaatcactcaaaaaggcaaactgccgctactgcaggtgcccgaa
caagaggccgaagaccgggtcatgcagatcgacgctgcaacccggcgcaatttggaactg
acacgatccttgtccggtggtcgcgctggctcgttgttatccgtaattgatcgaactgtc
acaccgggtggtggtcgtttgcttgaacaacgtctgtccagcccatcgcgcaatcttgac
gtgattcatgaccggttggccgcattggattttgccgtcaaccagagccaactgtccgag
cagttgcgcgatgctcttaggcaaagcccggatctggatcgtgcgctgtcaagactggcg
ctggaccgcggaggaccgcgcgatttggccgcaatccgcaacggactgacccaggccgaa
accatcgccgccttatgccaagacttggacctgcccaacttgatcgcaggcgccatcgac
aatctacagggctttgacgatctgctggctatgttggacgcctcactggttgccgaaccc
ccgttgctggcccgcgatggtgggtttatcgcggccggctacaacgacgaattggatcag
gccaggaccctgcgagacgagggccggtcggttattgctgcgatgcaaaatcaatacgca
gagcacaccggcatcagctcactgaagatcaagcacaacaacgtacttgggtatttcatc
gagacgacggccacacatgcggataaaatgttgtctgcgccattatctgaaagctatatc
caccgccaaaccaccgccaatcaagtccggttcaccacggttgagctaagcgagatcgaa
accaaaatcctgaatgccggtaatcaggccctagagatcgaaaagcggctctattccgaa
gtttccggctgtattttggacctttccgcccgcttgaacagtgcggcacgtggattggcc
gaactggatctattgaccggccttgcggatctggcaaaaggtgaaaactggaaccgcccg
aaggtcgacgccagccgggcatttgaaatttcaggtggtcggcatccagttgtggaacag
gcgttgcgccagcaggttggtgaagttttcatagccaacgattgcgacttaaccgctgct
gacggggccgcaatctggttgcttaccggccccaacatggccggtaaatctacttttttg
cggcagaacgcgctgattgctttgttggcgcaaatcggcagttacgtgccggctgatacc
gcgcatatcggtgtggtcagtcaactgttcagtcgcgttggggcatcggatgatctggcg
cgtggacggtctacatttatggtggaaatggttgaaaccgccgccattctgaaccaggcc
gacgatcgcgcattggtaattttggatgaaattggccgtggaacggccacatacgatggc
ctgtccatcgcctgggccacattggaacatctgcacgagaccaacagatcccgcgccctg
ttcgccacccactatcacgagctgacccaactggccgccacactggctggcgtcgacaac
gccaccgtcacggtaaaagaatgggaaggcgaagtcatctttctgcatgaagttcgcaag
ggcgcggcagatcgttcctatggtgtacaagtggcccaacttgccggcctgcctgctacg
gttgtcgcccgcgcccgcgatgttttggacatgttggaggaatccagtcgagacggagcc
ggatcaaaaattaaaatcgatgatctgccactttttgccgccgcaccaccacctcagcca
gcagttcccaagggtccctcaccgcttgaagagatgcttgacagcgttcaccctgacgac
ctgtctccacgtgaagcactagagatgctctaccagttgaaaaacgctaatcaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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