KEGG   Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_4315
Entry
SPC_4315          CDS       T00862                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sei  Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPC_4315 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sei03400]
    SPC_4315 (uvrA)
DNA repair and recombination proteins [BR:sei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SPC_4315 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SPC_4315 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 NACHT Viral_helicase1 cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: ACN48377
UniProt: C0Q530
Position
complement(4403166..4405991)
AA seq 941 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKENIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH
VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatattaacctcgtc
atcccccgcgacaaactgattgtcgtgaccgggctttcgggttcaggcaaatcctcactg
gctttcgacactctgtatgccgaagggcagcgtcgttacgttgaatcgctctccgcttac
gcgcggcagtttttgtcgctcatggaaaaaccggatgtcgaccatattgaggggctatcg
cccgcgatctcaattgaacagaaatcgacatcgcacaacccgcgctctacggtgggtact
attaccgagatccacgactacctgcgcctgctgtttgcccgcgtgggcgagccgcgttgt
ccggatcatgacgtgccactggcggcgcaaaccgttagccagatggtcgataacgtactg
tcacagccggaaggcaaacgtctgatgctgctcgcgccgattattaaagagcgtaaaggc
gaacacaccaaaacgctggaaaatctggcaagccagggttacattcgcgcccgtattgac
ggcgaagtctgcgatctctccgatccgccgaagctggagctacaaaagaaacataccatt
gaggtggtgatcgatcgcttcaaagttcgcaacgatctttcccaacgcctggcggagtcg
ttcgaaacggcgctggaattatccggcggcacggcggttgttgccgatatggacgatgag
aaagcggaggagcttctgttctccgccaattttgcctgtccgatttgcggctacagtatg
cgcgaactggaaccgcgtctgttctcgttcaacaacccggcaggcgcctgcccgacctgt
gacgggctcggcgttcagcaatatttcgatccggaccgcgtgatccagaatcccgacctg
tcgctggcaggcggcgcgattcgtggttgggatcgtcgcaatttttactactttcaaatg
ctcaagtcgctggcggaacactataagttcgacgtggatgcgccgtgggcaagcctcagc
gccaacgtacacaaagtcgtgctgtacggttccggcaaagagaacatcgaatttaaatat
atgaacgatcgcggcgatacctccgtgcgccgccatccgttcgaaggcgtgctgcataat
atggaacgccgttataaagagacggaatccagcgcggtgcgcgaagagctggcgaaattc
atcagtaatcgcccctgcgccagctgtgaaggaacgcgactgaatcgcgaagcgcgccat
gtatttgtggaaaatacgccgctgcctgctatttccgatatgagcattggccatgcgatg
gattttttcactaatctcaagctttccgggcaacgggcgaaaatcgccgaaaaagtgcta
aaagagatcggcgatcgcctcaagtttctggtgaacgtcggcctgaactatctcacgctc
tcccgctcggcagagacgctttccggcggcgaagcccagcgtattcgtctagcgagccag
ataggcgccgggttagtcggcgtgatgtatgtgctggatgaaccgtccatcggtctgcac
cagcgcgataatgaacggctgctgggtacgctgattcatctgcgcaatcttggcaatacc
gtgattgtggtggaacacgatgaagacgccatccgcgccgccgaccatgtgattgatatt
ggccccggcgcgggcgttcacggcggcgaggtggtggcggaaggcccgctggaagccatt
atggcggtaccggaatcgctgaccggccagtacatgagcggtaaacgcaaaattgaagtg
ccgaaacaacgcgtgccggcaaatccagaaaaagtgctcaaactcaccggcgcgcgcggc
aacaacctgaaagatgtgacccttacgctaccggtagggctgtttacctgtatcaccggc
gtctcgggttccggtaaatcgacgctgattaacgacacgctgttccccatcgcccagcgt
cagttaaacggggcgactatcgccgaaccggcgccgtatcgggatattcaggggctggaa
catttcgataaagtgatcgatatcgaccagagcccaatcgggcgcaccccgcgttccaac
ccggcgacctatacgggcgtctttaccccggttcgcgagctttttgctggcgtgccggag
tctcgctcgcgcggctacacgccagggcgattcagcttcaacgtgcgcggcggtcgctgc
gaagcgtgccagggcgatggcgtcattaaagtcgaaatgcactttctgccggatatttac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgggaaacgctggagattaagtac
aaaggcaagaccatccacgaagtactggatatgaccattgaagaagcgcgtgagttcttt
gatgcggttccggcgctggcgcgtaagctgcagacgctgatggacgtggggctgacctat
atccgtcttggtcagtcggcgacaacgctttccggcggcgaggcccagcgcgtgaagctg
gcgcgcgaactgtcgaagcgcggcaccgggcagacgctgtatattctcgacgagccgacc
accggcctgcactttgccgatattcagcagttgcttgacgttctgcatcagttgcgcgat
cagggcaacaccatcgtggtgatcgaacacaacctggacgtcattaaaacggcggactgg
attgtcgacctcggcccggaaggcggcagcggcggcggcgaaattctcgtctccggtacg
ccggaaaccgtggcggagtgcgaggcgtcgcatactgcccgcttccttaaacctatgctc
aaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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