KEGG   Serratia fonticola DSM 4576: WN53_09190
Entry
WN53_09190        CDS       T04030                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sfw  Serratia fonticola DSM 4576
Pathway
sfw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WN53_09190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfw03019]
    WN53_09190
Enzymes [BR:sfw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     WN53_09190
Messenger RNA biogenesis [BR:sfw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     WN53_09190
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: AKG69270
UniProt: A0A0F7D1N0
Position
complement(2079783..2081072)
AA seq 429 aa
MSKTHLTEQKFSDFALHPLVLEALEKKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAKEGRQTNQPRALIMAPTRELAVQIHSDAEALSQSTGLKLGLAYG
GDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRLVRPRGNNGPRRNSSAPRRGGA
PRNNRKRSG
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgttagtc
cttgaagcccttgagaaaaaagggtttcacaactgcacgcccatccaggcgttagcattg
ccgctcaccctcagtgggcgcgacgttgcaggtcaggcgcaaaccggtaccggaaagacg
ctggcatttttagcgtctacttttcactatttgctgtcccacccggcgaaagaaggtcgc
cagaccaaccagccgcgcgccttgatcatggcgcctacgcgtgaactggcggtgcagatc
cattccgatgcagaagctctgtcgcagtctaccgggttgaagcttggcctggcctacggc
ggcgatggctatgacaaacagctgaaagtgctggaaagcggcgtagatattctggtgggg
accaccggccgtttaatcgactacgccaaacaaaattatatcgatctgggtgctatccag
gttgtggtgctcgatgaagccgaccgcatgtacgatctgggctttatcaaagatatccgc
tggctgttccgccgtatgcctgcggtcgatcaacgcctgaacatgttgttctctgccacc
ctgtcctatcgcgtacgcgagctggcctttgagcaaatgaacaatgccgaatatgtggaa
gttgaaccggaacagaaaaccggccaccgcattcaggaagagctgttctacccttccaac
gaagaaaaaatgcgcctgctgcagacgctgatcgaggaagagtggccggaccgctgcatc
atcttcgccaacaccaagcaccgctgtgaagacatctggggccatctggctgccgacggt
caccgcgtaggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgtattctggac
gacttcaccaagggtaacctggatatcctggtcgccaccgatgtcgccgcacgcggcctg
catatcccgttggtgactcacgtcttcaactacgatctgccggacgactgcgaagactac
gtgcaccgcattggccgtactggccgcgcgggcgaaagcggtcactccatcagcctggcc
tgtgaagagtacgcgcttaacctgcccgccatcgagacttataccggccacagcattcct
gtgagcaagtacaacagcgatgcgctgctgagcgatctgccagcaccgaagcgcctggtg
cgcccacgtggcaacaacggcccacgccgtaactcttccgcgccacgtcgtggtggtgcg
ccacgtaacaaccgtaaacgttcgggctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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