KEGG   Sinocyclocheilus grahami (golden-line barbel): 107559512
Entry
107559512         CDS       T04918                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107559512
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107559512
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107559512
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgh04147]
    107559512
   00536 Glycosaminoglycan binding proteins [BR:sgh00536]
    107559512
Exosome [BR:sgh04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   107559512
Glycosaminoglycan binding proteins [BR:sgh00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107559512
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 107559512
NCBI-ProteinID: XP_016098858
Position
Unknown
AA seq 1669 aa
MEGENHLQHWNTLRCFLLFFAVLILTTEVNAGVKKSGGPCGGRDCSGGCQCYPEKGARGL
PGPLGLQGPTGPNGRPGDPGLQGPKGEKGDRGRGGLMGPKGSVGMEGVPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGESGTPGIPGLNGEPGISGRPGMKGEKGDPLEMWVYMERFR
GDPGPPGFPGFIGPTGNPGYRGLPGFQGPWGSTGIKGVKGQKGENTKMLKGLKGELGENG
EPGLPGPYSQTRPVPSEWQGEKGLKGYKGEPGDLGYLSTKGETGVSGFPGQRGNPGLNGF
PGPRGDIGLPGFPGNYGRKGDRGEPGELIGPFEDTGVGPPGPPGERGPIGEYGPKGTKGL
PGPPGPPPSEQQPVDLWGPEGPHGPKGAKGDAGEPGNPAIHPGPPGPDGLPGFQGPPGPK
GSLEEFFKGAPGPRGRPGNAGKKGPKGDHGLCECTVKSTPGPAGLPGDAGDIGMAGDWGQ
HGDQGDPGPRGVDGVPGFSGARGLSGPKGRKGELRAATQKGLPGDHGDPGASGFPGEEGR
PGFDGKDGEPGLQGSSGEGPVGEPGGKGYPGWPGPPGLIGPIGQPGQVLGATKGVRGLPG
DEGQVGIDGKQGSPGAPGDCSPQGGDQWNIPVECIGDPGPPGEIGQPGLPGFSGFPGLQG
AKGIQGLSGEPGAKGEKGEPGRGGPLGPRGFVGPQGDLGYPGSKGVEGTPGLSGTPGLDG
APGEKGEHGEVLGASSGAPGVPGLPGQRGVIGLPGDPGPQGHPGMEGMPGMIGLKGESGP
PGLLGEIGRPGPPGTFGFPGQSGQVGPPGPSGKTGEPGPSGERGYQGDPGLPGPRGVKGV
TGKPGNVGLPGNFGSPGDPGQQGPFGFDGFPGLKGSRGGQGMMGFTGMPGETGLKGFSGQ
KGTIGDPGQQGAKGPTGPPGEKGERGLVGRPGEKPIIHITPHMKEVMKGAKGDHGKMGDH
GFTGPRGTKGLPGVPGKEGKDGHPGGPSETKGTRGLPGVEGLPGPKGMPGLTGLPGIEGF
PGLPGPKGGKGSSGAYGRPGESGIKGIKGVLGPSISLPGSTGLRGETGLPGSLGEKGLTG
QSGDRGSPGFNGIEGMKGYPGEPGKVGPPGSDGLHGFPGTQGHKGWPGVPGQTGTPGIQG
QPGQKGFPGLKGLFGLDGLKGQKGINGAPGSDNWGPPGGSGAKGERGETGIPSTEAGVPG
EVGFKGFIGDSGNKGESGHPGVPGPRGPQGLSDIKGVPGDYGFPGPKGLPGFPGPRGIPG
DPSPFGARGENGNPGDFGLTGEKGVRGDSGEKGPSGEPGVSGRKGENGETGMMGHPGRRG
FEGDRGPVGPKGNTGPPGIPGLPGSKGLPPVPLKLPGERGPPGPMGIQGPQGWHGNPGPA
GPPGDPGVLGPNGEKGMPGLPGIPGNPGFRGEPGQLGHPGLQGEEGTRGSPGLPGTIGMS
GRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFN
TMPFLYCNPGDVCYYANRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAI
HSQDITIPQCPADWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLENFRTTPFIECNGAK
GTCHYFANKQSFWLTSIDQTFQSSPSSETLKAGQLLSRISRCQVCMKNL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggagggtgagaaccatctacagcactggaacacattaaggtgttttctgttgttcttt
gcagtccttatccttacaacagaggtcaacgcaggagtgaagaagagcggtggaccatgt
ggggggagagactgcagcggagggtgtcagtgttatcctgagaagggtgcgaggggattg
cctggacctcttggtctccaaggtcccacaggccctaatgggcgaccgggagaccctggt
ctccagggccctaaaggagagaagggagaccgtggcagaggaggccttatgggtccaaaa
ggaagtgtgggaatggaaggtgttccagggtttaatggagcagatggtgttccgggccat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaatggaacccgggga
gaatcaggaacgccaggcattccaggactcaatggcgaacctggaatatcaggtcggcca
ggaatgaagggggagaagggtgaccctttggagatgtgggtttatatggaaagattcagg
ggagatccaggaccaccaggttttccaggatttattggaccaactggtaacccagggtac
agaggactgccaggatttcaaggtccttggggttctactggcattaaaggtgttaaagga
caaaagggtgaaaacactaaaatgttaaaaggactcaaaggagaactgggggagaatgga
gagccgggccttccaggaccttactcacaaacccgtccagtcccttcagaatggcagggt
gaaaaaggcttgaaaggttataaaggagaaccaggagatttgggatatttatctaccaaa
ggagagactggtgtgtcagggtttccaggacaacggggaaacccaggactaaatggcttt
ccaggacctaggggtgacattggactaccaggtttcccaggaaattatggtcgcaaggga
gatagaggagaacctggagagctgattggtccttttgaagatactggagtgggtcctcca
ggacctccgggagagcgtgggccaattggagagtatggtcctaagggtacgaaaggactg
ccgggtcccccaggcccccctccctctgaacaacaaccagtggatttgtggggtccagag
ggaccacatggaccaaagggagccaaaggtgatgctggagaacctggtaatcctgccatt
catcctgggccacctggccctgatgggcttcctggatttcaaggacctcccggacccaag
ggatcattagaagaattcttcaaaggagcaccaggaccacgtggacgtccaggaaatgca
ggaaaaaagggaccaaagggtgaccatggtctgtgcgaatgcactgtaaaatccacacct
ggtcctgcgggtcttcctggtgatgctggggacattggcatggcaggagactggggtcag
catggtgatcagggagacccgggacccagaggcgtggatggtgtacctggtttctctggt
gcaagaggattatctggacccaaaggcagaaaaggagagctgagagccgccacacagaaa
ggactacctggtgaccatggggacccaggtgctagtggtttcccaggagaggaaggaagg
cctggatttgatggcaaagatggtgaaccaggtcttcaaggatcttctggagaaggtcct
gtaggtgagcctggagggaagggatacccaggttggccaggtcctccaggtctaataggt
ccgataggacaacccggtcaagttcttggagcaactaaaggtgtaaggggccttcctgga
gatgaaggacaagttggtattgatggaaaacaagggtcacctggtgctccaggagactgt
agcccacaaggaggagatcagtggaatattccagtggaatgtattggagatcccgggcca
ccaggagagatagggcagcctggacttccaggattcagtggatttcctggactgcaaggt
gctaaaggcatacaaggtctttctggagaacctggggccaaaggagagaaaggtgaacca
ggaagaggaggtccacttgggccaagaggttttgttggacctcagggcgacttaggttat
cctggctccaaaggtgtggaaggaactccaggcctttctggtacaccaggtttggatggt
gctccaggggaaaagggtgagcatggtgaagttttaggagcatcttctggagcccctgga
gtcccaggactaccaggacagaggggtgtcattggtcttccaggagacccaggacctcaa
ggacacccgggtatggagggaatgccaggtatgattggccttaagggtgaaagtggccct
ccaggtcttctaggcgagataggaagacctggaccgccaggaacatttggctttcctggg
cagtctggtcaagtaggacctcccggaccatctggaaaaaccggagaaccaggtccaagt
ggagaaaggggatatcagggagacccaggccttcctgggcccagaggagtaaagggtgtc
actggaaaaccaggaaatgttggtcttccaggcaattttgggtccccaggagatccagga
caacaggggccatttggttttgatggttttccagggttaaaaggttccagaggtggtcag
ggcatgatgggtttcactggaatgccaggtgagacaggtctgaagggcttttcgggacag
aaaggaacaataggtgatccaggacaacaaggtgcaaaaggacctactggccctccaggt
gaaaaaggtgagagagggttggtggggcgtccaggtgaaaagccaatcatacacataaca
ccacatatgaaagaggtcatgaagggagctaaaggtgaccatggaaaaatgggagatcat
ggcttcactggtcccagaggtacaaaaggtctaccaggtgttccaggaaaggagggtaaa
gatggacatccaggtgggcccagtgaaacaaaaggtactagaggtcttcccggagtagaa
ggacttccagggcctaaggggatgccagggcttacaggacttcctggaattgagggtttt
cctggattgcctggacccaaaggtggcaaaggctcatctggtgcctatggacggcctgga
gaatctggaatcaagggaataaaaggtgtcttgggtcctagcatcagtcttccaggatca
actggactgagaggtgaaactgggctgcctggatctttaggtgaaaagggactcacaggt
cagtctggggacagaggaagtcctggttttaatggcattgaagggatgaaaggctatcca
ggagaacctggaaaagttggaccaccaggttctgatggcctacacggtttcccaggaacc
cagggtcataagggctggcctggcgtgcctggacagacaggaacccctggaatccaaggc
caaccaggacaaaaaggatttcctggtcttaaaggcctttttggattggatggcctgaaa
gggcaaaagggtatcaatggtgctccaggttctgacaactggggtcctcctggtgggtca
ggagcaaaaggggagagaggagagactggcatccccagcactgaagccggtgtccccgga
gaggtgggattcaagggtttcattggagattcaggtaataagggtgaatctgggcatcca
ggtgtaccgggtcctcggggtccacaaggattatccgatataaaaggagtgccaggcgac
tatggctttccaggcccaaaaggacttccaggtttccctggtcccagagggatcccaggt
gacccatctccattcggagcaagaggagagaatggaaatccaggtgattttggattaact
ggagaaaaaggagtccggggggactcaggagaaaaaggaccatcaggggaacctggagtg
tcaggaagaaaaggggaaaatggagaaacaggaatgatgggacatccaggaaggcgtggt
tttgaaggcgacaggggccctgttggacctaaaggaaatactggacccccaggtattcct
ggcttacctggttctaaagggcttccaccagtcccactgaaactaccaggggagagagga
ccacctggcccaatgggtattcaaggaccacagggatggcatggaaacccaggccctgct
ggacctcctggtgatccaggggttttgggtccaaatggggaaaaaggcatgccaggtctc
cctggaataccaggaaatccaggcttccgtggagagcctggacaattgggccaccctggt
ctacaaggtgaagaagggacccgagggagccctggtttacctggtactattggaatgtcc
ggccgcagtgttaatgttggctacctgctggtgaagcacagtcagtctgagcagatcccc
atgtgccctgtgggtatgtccaagttatgggatggttacagtctcctgtactttgaggga
caggagaaggcccacaaccaagacctgggtctagccggctcatgtctcccccgttttaac
accatgcccttcctgtactgcaatcctggagacgtatgctactatgccaaccgcaatgac
aaatcctattggctgtccaccaccgcaccaattcccatgatgcccgtggaggaggccgaa
ataaaaccgtacatcagccgctgctccgtgtgcgaagctccatccgtggccatcgccata
cacagtcaagatataacaattccacaatgcccagcagactggagaagtctctggattggc
tattccttccttatgcacacggcagctggagatgaaggtggcggtcagtctctggtgtct
ccgggctcctgtctagaaaatttccgcaccactcccttcatcgagtgtaacggggccaag
ggtacatgtcactacttcgccaacaagcaaagtttctggttgacgtctatcgatcagacc
ttccagagttccccttcctctgagacactgaaagccggtcagctcctgtcacgcatcagc
cgctgccaagtgtgtatgaagaacctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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