KEGG   Sinocyclocheilus grahami (golden-line barbel): 107565941
Entry
107565941         CDS       T04918                                 
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    107565941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107565941
   03041 Spliceosome [BR:sgh03041]
    107565941
   03036 Chromosome and associated proteins [BR:sgh03036]
    107565941
Enzymes [BR:sgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107565941
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107565941
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107565941
Spliceosome [BR:sgh03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    107565941
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107565941
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-GeneID: 107565941
NCBI-ProteinID: XP_016106743
Position
Unknown
AA seq 709 aa
MSHVVVDGSHGLDQQLAVLDLNSADGQGAGSGRRYIPPHLRNKDASQNDSPGWDGGRSNG
FVNGYQDGHMNGTANFGRGPPRNDRGGRGGFRGNRNGGSFNQPMHNAGYGSYENKDGGWN
SVVNSDAYTSFGGRSDRGKSAFNDRGAGSRGSRYERGGFGGGTGGNSRWVEESRDEEDWS
KPLSPNERLEQELFSGSNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMSNITL
TRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEALQATQAS
TQQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSRVRPCVVYGGADIGQQIRD
LERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPP
KGARQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLL
DLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRC
PIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNI
TKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSGGFGARDYRQMAGGGNAFNN
RGARNTGGHGGNRGFGGNKGGFGSFGGDSYGGNYGNYGGNYAQVDWWGS
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgagtcatgtggtcgtcgacggttcacacggtctagaccagcagcttgctgtcttagac
ttgaactcagctgatggacagggtgctggctctggtcggcgttacattcctcctcatttg
agaaacaaagacgcatcacaaaatgattctccaggatgggacggcggtcgtagcaatggt
tttgtcaatgggtaccaagacggtcatatgaatgggactgcaaacttcggccgtggacct
cctcgtaatgacagaggtggacgtggtggctttcgtggaaataggaacggtggttccttc
aaccagccaatgcataatgcgggttatggcagttatgagaacaaagatggaggctggaac
tctgtggtaaacagtgatgcctacactagctttggtgggcgttctgacagagggaagtct
gccttcaatgatagaggagctggctcaagaggaagcaggtatgagcgtggaggctttgga
ggaggaacaggagggaacagtcgttgggttgaagaatccagagatgaagaggactggtca
aagccactgtcccccaatgagcgtctggaacaggagctgttttctgggagcaacacgggg
attaactttgagaagtatgatgacattcctgtggaggccactggaacaaacagtcctggg
catattgagagtttccatgatgtggacatgggcgagatcattatgagcaacatcactctg
acccgctacacacggcctactcctgttcaaaagtatgcaatccccatcatcaagaccaag
agggacctgatggcctgtgctcaaacaggctcggggaagactgcagccttcttgcttcct
gtccttagtcagatctacactgatggacctggagaggcactgcaggccacccaagccagc
acccagcaggagaatgggaagtacggccgtcgtaagcagtatcccatctctctggttctg
gctccaaccagagaacttgctcttcaaatttatgatgaggccagaaagttctcttaccgc
tccagagtgcgcccgtgtgtggtgtacggaggcgcagatatagggcagcagatccgtgat
ttggaaagaggctgtcacctgctagtggccacaccgggtcgtctggtagacatgatggag
cggggcaagattggcctagactactgcaaatacctggtgttggatgaggcagacagaatg
ctcgatatgggttttgaaccccagatcagacgtattgtggagcaggacaccatgcctcct
aaaggtgctcgccagaccatgatgttcagtgccaccttcccaaaagagatccagattctg
gcccgtgactttctggaggagtacatcttcctggctgtgggccgtgtgggctccacctca
gagaatatcacccagaaggtggtttgggtggaagaaaatgacaagcgctccttccttctt
gacctgcttaatgcaacaggcaaggattctctcacactggtgtttgtggagactaagaag
ggtgctgatgctcttgaggacttcctctaccgcgaaggctatgcctgcaccagtatccat
ggtgaccggtctcagcgtgaccgtgaggaagcgctccaccagttccgctctgggcgctgc
cctatcatggttgccaccgctgtggcagcacgtggccttgacatctccaacgtgaaacac
gtgatcaattttgacttgcccagtgacattgaggaatacgtccaccgcatcggtcgtaca
ggccgtgtaggaaaccttggactggccacatccttctataatgataagaacagcaacatc
actaaagatctgctggacatcttggtggaggccaaacaggaggtgccttcctggcttgag
aacctagcctatgagcaccagcacaagagcaccaaccgtggacgccccaagagattctct
ggtggctttggggccagggattaccgccagatggctggaggtggcaatgctttcaacaac
cgtggtgctcgcaacactggtggccatggagggaatagaggttttggaggcaataagggt
ggttttgggagcttcggtggtgacagctacgggggcaactatggaaactatggaggaaac
tatgcccaggtggactggtggggcagctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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