KEGG   Sinocyclocheilus grahami (golden-line barbel): 107567702
Entry
107567702         CDS       T04918                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010  MAPK signaling pathway
sgh04137  Mitophagy - animal
sgh04141  Protein processing in endoplasmic reticulum
sgh04210  Apoptosis
sgh04217  Necroptosis
sgh04621  NOD-like receptor signaling pathway
sgh04622  RIG-I-like receptor signaling pathway
sgh04920  Adipocytokine signaling pathway
sgh05132  Salmonella infection
sgh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107567702
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107567702
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    107567702
  09143 Cell growth and death
   04210 Apoptosis
    107567702
   04217 Necroptosis
    107567702
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107567702
   04622 RIG-I-like receptor signaling pathway
    107567702
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    107567702
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107567702
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107567702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107567702
   04121 Ubiquitin system [BR:sgh04121]
    107567702
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107567702
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     107567702
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    107567702
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 ADIP zf-RING_5 zf-C3HC4_4 TMF_DNA_bd Paramyxo_NS_C zf-RING_6 Sina_ZnF
Other DBs
NCBI-GeneID: 107567702
NCBI-ProteinID: XP_016108927
UniProt: A0A672QQQ1
Position
Unknown
AA seq 536 aa
MISTAGTVGKWKAMARPSLPSSLDSTLPGISREVLSVSMEPKYQCQQCKEILRKPFQAQC
GHRFCVFCFKQLTSSGPIPCKTCRAEGIFEEATSMLNIAVAFPDNAARREIDSLPAKCQN
DGCSWSGTLKEYEGQHEGRCDFERVKCEACQALILVREKDHHNERECEARTLNCKYCKVT
FNFKEIKAHDEICQKYPMQCKDCGKKKIPREKFQEHIKSCAKSKLACQFSEIGCRAVVDN
GKQQEHEQTSMTEHLRLMLAVLSSERLRAEGAGELQEDSGLGLYRGPEDASPAGAHAAGH
NAGRGGGPGVQQKVTALENIVCVLNREVERSALTLEALSRQHRLDQEKIDNLSNKVRQLE
RTLTMRDLQLAESEQSLRELQFCTYDGVFIWKIADFSRRRQDAVGGRAPAMFSPAFYSSK
YGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIID
AFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVDLTSL
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgatcagcactgctggcactgtgggtaaatggaaggcaatggcacgtccatctttacct
tcttcattggactccacattacctgggatatctcgagaagtgctgtctgtgtccatggaa
ccaaaatatcaatgtcagcagtgcaaagagattcttaggaaacctttccaagcacagtgt
ggacatcgcttctgtgtgttctgtttcaaacaactcaccagctcggggcccataccctgc
aaaacttgtcgtgctgagggtatatttgaagaggcaacatctatgctcaatattgcagtg
gcgtttcctgataatgcagcacgaagggaaattgatagcttgccagccaaatgccaaaat
gatggctgtagttggtctggaacactgaaagagtatgagggtcagcatgaaggtcgttgt
gactttgaacgtgtaaaatgtgaagcatgtcaagcactcatcttggtccgtgaaaaagac
caccacaatgagcgggaatgcgaggccagaaccctgaactgcaaatactgcaaggtcaca
ttcaacttcaaagaaattaaggcccatgacgaaatatgtcagaaataccccatgcaatgc
aaagactgtggtaaaaagaaaatccccagagagaagtttcaagagcacatcaagtcttgt
gcaaagtctaagttggcgtgccagttcagtgaaattggctgcagggcagtggttgacaat
ggtaagcagcaggagcatgagcagaccagcatgacggaacatttgcgtctcatgctagcc
gtgctgtcctctgagcgcctgcgggccgagggtgctggagagttgcaggaagattccgga
ctgggattgtatcgcggacctgaagacgcatctccagcgggggctcatgctgctggccat
aatgcaggaagaggaggcggtcctggtgtacagcagaaagtcacagctttggagaacata
gtgtgtgtgttgaacagggaggtggagcgctcggccctcaccctggaggcactatcccgt
caacatcggttagatcaggaaaagatagataacttgtcaaacaaggtgcgacagctagaa
cggactttaaccatgcgagatctgcagttagcagaatcagagcagtccttgcgggagctg
cagttttgtacatacgatggagttttcatttggaaaattgcagacttctctcgccgcaga
caagacgcagtggggggccgggcacctgccatgttctcacctgcgttctactccagtaaa
tatgggtataagatgtgtctgagactctacctgaatggtgacggcacaggccggggcact
catctttctcttttctttgtggtcatgaggggcaaatatgatgcattgctgaagtggccc
tttagccagaaggtgacattgatgttgttggaccaaaacaacagagagcacatcattgat
gcttttaggcctgacgtgagctccacatccttccagagacccatcagtgagatgaacata
gccagtggttgtcctctcttctgccctctagccaagctggcaggcaaaagctcatatctg
agagatgacaccatatttattaaagccatagtcgacctcaccagcttataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (14)   
   Pfam (14)   
All databases (43)   

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