KEGG   Sinocyclocheilus grahami (golden-line barbel): 107582269
Entry
107582269         CDS       T04918                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107582269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sgh03041]
    107582269
Enzymes [BR:sgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     107582269
Spliceosome [BR:sgh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107582269
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107582269
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD
Other DBs
NCBI-GeneID: 107582269
NCBI-ProteinID: XP_016123524
Position
Unknown
AA seq 448 aa
MVMVGYSICFEDCTSEHTILKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILF
GLIKDVARFRPDLKVLVASATLDTELFSCFFDDAPVFRIPGRRFPVDIYYTKAPEADCLE
ACVVSVLQIHVTQPAGDVLVFLTGQEEIEACCELLQERCRRLGSKISEFVVLPIYANLPS
DMQAKIFNPTPPGAAKTKQTDAKSYVVVATNIAETSLTINGIIYVIDPGFCKQKSYNART
GMESLIVTPCSPCSEEILTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHIVLLN
VYTQWVESGYSTQWCSENFIQFRSMKTLMDRIEVELCSCNGESVPIHKAVTAGYFYNTAC
LSKGGYKTVKHQQTVYIHPXSSLFEEQPRWMIYHELVFTTKVFMRQVIEIESGWLLEVAP
HYYKNKELEDGSSKKMPRKQGKAREELG
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggtcatggtgggctacagcatctgttttgaggactgtacgtcagaacacaccatcctg
aagtacatgactgatggcatgttactcagagagtttcttacagagcccgacctcgccagc
tacagtgtgatcatcatcgatgaggcccacgagcgaacgttacacacagacatcctcttc
ggtctaatcaaagacgttgcacgtttccgccctgacctgaaggttctggtggccagcgcc
actctggacacagagctcttctcttgcttctttgacgatgcacccgtatttaggattcca
ggtcgtaggtttcctgtggatatttactacacaaaggctccggaggctgactgcctagaa
gcatgtgttgtgtcagtgctacagatccatgtcactcagccggctggagacgtactggtc
ttcctcactggacaggaggagattgaggcgtgctgtgaacttctacaggagagatgtagg
agactgggctcgaagatatctgaatttgttgttctgcccatctatgccaacttgccctcg
gacatgcaggccaagatcttcaatcccactccgcctggagccgcaaaaaccaaacaaact
gatgctaaatcttatgttgtggtggccacaaatatcgcagagacgtctctcacaatcaat
ggcatcatctatgtgattgatccaggtttctgcaaacaaaagagctacaatgcaaggaca
ggaatggaatctctcattgtcactccctgttcaccatgctctgaggagattctgaccatc
gcggccatgctgtcagtgaacaactccatcttctaccggcccaaggacaaagtggttcat
gccgacaacgctcgaatgaactttgtggtaccaggaggagatcacattgtgctgctcaat
gtatatacacagtgggtagagagtggttactccactcagtggtgctccgagaacttcatc
cagtttcgctccatgaagacgttgatggacaggatcgaggtggaactgtgcagctgcaac
ggtgaaagtgtgcccattcacaaggcggtgactgcaggatatttctacaacacggcatgc
ttgagcaaagggggttataaaacagtcaaacaccagcagactgtttacatccatccanac
agctcactctttgaggaacagccacgttggatgatctaccacgagctggtcttcaccacc
aaagtgttcatgagacaggtgatagagattgaaagtggctggctgctggaagtggctcct
cattattataagaacaaagaactggaggacggcagcagtaagaagatgccccgcaaacaa
ggcaaagcccgtgaagagctgggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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