KEGG   Shewanella sp. MR-4: Shewmr4_1180
Entry
Shewmr4_1180      CDS       T00388                                 
Name
(GenBank) A/G-specific DNA-adenine glycosylase
  KO
K03575  A/G-specific adenine glycosylase [EC:3.2.2.31]
Organism
she  Shewanella sp. MR-4
Pathway
she03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:she00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Shewmr4_1180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:she03400]
    Shewmr4_1180
Enzymes [BR:she01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.31  adenine glycosylase
     Shewmr4_1180
DNA repair and recombination proteins [BR:she03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Shewmr4_1180
 Prokaryotic type
     Shewmr4_1180
SSDB
Motif
Pfam: HhH-GPD NUDIX_4 HHH Whib EndIII_4Fe-2S HHH_8
Other DBs
NCBI-ProteinID: ABI38260
Position
complement(1383336..1384454)
AA seq 372 aa
MKSTATFATRIVNWYDNHGRKTLPWQQDKTPYRVWVSEIMLQQTQVATVIPYYQRFMARF
PDVLTLANAPDDEVLHHWTGLGYYARARNLHKAAKMVRDLYQGQFPTDFEQVLALPGIGR
STAGAVLSLSLGQHHPILDGNVKRVLARHGAIAGWPGQKPVEEQLWQLTEQLTPGQDIQK
YNQAMMDIGASICTRSKPNCAACPVAIDCKAQLMGRQTEFPGKKPKKTIPEKAAWMLVLL
KDNQVFLAKRPPAGIWGGLWCFPEFSTQAALNAELETQGYHAAQLEPLIGFRHTFSHFHL
DIQPMLLNLDSQANGYDKQTSAMQSVGAVMEQNQSLWYNINQPSKVGLAAATERVLANLG
SLVAIASNLDSQ
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaaatctacagccacctttgctacacgtatcgttaattggtacgacaaccacggtcgt
aaaaccctcccttggcagcaagataaaaccccatatcgcgtatgggtttcagagattatg
ctgcaacaaactcaggtagcgactgttatcccctattaccagcgttttatggcacgtttc
cccgatgtgttaaccctcgctaacgcgccggatgatgaagtactgcatcattggactggg
cttggttattacgccagggctcgcaatctacataaagccgctaagatggttcgcgatttg
tatcaagggcaatttccaacagactttgagcaagtgttagcgctgcctggtattggccgc
tcgacagcaggtgcagtgttatccctatcacttgggcaacatcatccgatcctcgatggc
aatgttaagcgcgtattagcaagacatggcgcgattgcgggctggcccggtcaaaaacct
gtggaagaacaactctggcaattaaccgagcagttaacgccagggcaggatattcaaaaa
tataaccaagccatgatggatattggtgccagtatttgtactcgcagcaaacccaattgt
gccgcttgccctgtggctattgattgcaaagctcaattaatgggaagacaaactgagttc
cccggtaaaaagcctaagaaaactatcccagagaaagccgcttggatgttggttttactc
aaagataaccaagtcttcttggctaagcgccctcctgccggcatttggggcggactctgg
tgcttccccgaatttagtactcaagccgcactcaatgcagagcttgaaacccaaggttat
cacgccgcacaactcgaaccattaatcggttttaggcatacctttagccatttccattta
gatattcaacccatgctactgaatttggatagccaagcgaatggctacgacaagcaaacc
tcggctatgcagagcgtgggcgcagtcatggaacaaaaccagtctctctggtataacatc
aatcaaccttccaaagtgggactcgccgccgcaacagagcgcgtgttggccaacttggga
tcactcgtagctattgctagcaacctcgacagtcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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