KEGG   Shewanella sp. FDAARGOS_354: CEQ32_09035
Entry
CEQ32_09035       CDS       T04944                                 
Name
(GenBank) PAS domain S-box protein
  KO
K03776  aerotaxis receptor
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf02020  Two-component system
shf02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:shf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CEQ32_09035
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    CEQ32_09035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:shf02035]
    CEQ32_09035
Bacterial motility proteins [BR:shf02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    CEQ32_09035
SSDB
Motif
Pfam: MCPsignal PAS_3 PAS PAS_9 PAS_4 TMP_3 PAS_8 BLOC1_2 DUF948 LMBR1 DASH_Duo1 CotH TACC_C Exonuc_VII_L
Other DBs
NCBI-ProteinID: ASF15113
Position
2005861..2007429
AA seq 522 aa
MSQSNPSHNKISNNHHHAQEIRLTPQDELISTTDTRGIITYVNQRFAEVSGYSAEELIGH
QHNKVRHPDMPSAAFKEMWQKLKSGQSWRGIVKNRCKNGDFYWVDAFVSPVFENGTIVGY
QSVRLQPQAAYVTRATAIYRRLLDNKSITKPLSLMQKRVVSAVVASTGLLIAGYLWGWGV
IIAGAILMGLNLAIFYDEAFRIPAKLIDMQTKYDSISRYIYSGADTSSILDFQLILLQAK
MNGVLGRTQDQANQLHAIADQLVVTTEQTYASLDQEKNQLEQLASAMEEMSSTITEVAQN
TQRTSTSINTAYDLCLKSSANMKANTQKVEQLAKSVADAANNANLLNQEAERVASAMGEI
DSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSSRTQLSTNSISQSVDKMFSML
NAWAKEMEQSRQHAEQCANDIQTSAKNVNTIYQEVSEIHTFAQQNAVAADQQRQVVHEIT
NNIHFITQSSSENLAATHQIGDAANHLKHSAEKALGLRRAFG
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagccagagtaaccctagtcacaataaaatcagtaacaaccatcatcacgcacaagag
atccgcctcactcctcaagacgaattgatatccaccacagatacccgcgggattattact
tatgttaatcaacgatttgccgaagtatcaggatacagtgccgaagaattaattgggcat
cagcataacaaagtacgtcatcccgatatgcctagtgccgcttttaaagagatgtggcaa
aaactaaaatccggccaatcttggcgtggcatagttaaaaatcgctgtaaaaatggcgat
ttttattgggttgatgcctttgtttctcccgtgtttgagaatggcacaattgttggttat
cagtcggttcgtctgcaaccgcaggcagcctatgtcactagagcaacagctatttaccgc
aggttattggacaataaatccattactaagccacttagtttaatgcaaaaacgtgttgtc
tctgctgtagttgcatcgacaggattattaattgcgggttacctttggggttggggagtg
attatcgctggcgcgattttaatgggccttaacttagctatcttctacgatgaagccttt
cgtattccggccaagttgattgatatgcaaacaaaatacgattctattagtcgctacatc
tactcgggagctgacacctcatcgattctcgattttcaattgatcttattacaagccaag
atgaatggcgtactcggccgcactcaagatcaagctaatcaattgcatgcgatagccgat
caacttgtggtcaccactgaacaaacctatgccagcctagatcaagagaaaaaccagctc
gagcaactggcaagtgcaatggaagaaatgagttcgacgattaccgaagttgctcaaaac
actcaacgaacctcaaccagcattaataccgcctatgatctctgcctaaaaagcagcgcc
aatatgaaggctaatacccaaaaggtcgaacagctggctaaatccgtcgccgatgcagcg
aataatgccaatctgcttaatcaagaagctgaacgagttgccagtgccatgggtgagatt
gattctattgctgagcaaactaacctgcttgccctcaatgccgccattgaagccgcgaga
gcgggtgaacaagggcgcggctttgcggtggtggccgatgaagtgcgcgccctatcgagc
cgcactcagttatcgaccaacagtatttcgcagagtgtcgataagatgttcagcatgtta
aatgcgtgggcaaaagaaatggagcaaagccgccaacatgcagagcaatgcgctaacgac
attcaaacctccgccaaaaacgtcaacaccatttaccaagaagtcagcgagatccacacc
tttgcacagcaaaatgcggtggccgccgatcagcagcgccaagtggtgcatgaaatcacc
aacaatattcatttcatcacccaaagcagcagtgaaaacctcgcggcaacgcatcagatt
ggtgatgccgccaatcatttaaaacacagcgctgaaaaagcacttggcctacgccgcgcc
tttggctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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