KEGG   Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5928
Entry
SHJGH_5928        CDS       T02531                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
Brite
KEGG Orthology (KO) [BR:sho00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sho02048]
    SHJGH_5928
Enzymes [BR:sho01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SHJGH_5928
Prokaryotic defense system [BR:sho02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SHJGH_5928
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2
Other DBs
NCBI-ProteinID: AGF65591
Position
complement(6708162..6711341)
AA seq 1059 aa
MSEQDWEFYALDQLAERGWQYVPGTALRPRDGQRRGWDDLVLYPRLRTAIATRYPSLPSA
AVEDAIEKLLAKFPANEVRLNWAFYQRLKAGVKVTYTTPGSQEERHVTVRPIDFANPHGN
DLVAANQVRVKGTRNRALIFDIVLYINGLPIAVIELKKASGPDDSRAAFDQIQNYRRELK
PDGIFRTVLLTLASDGISARLGTPFTPWQHMAPWHAEEDGTLLRSHERQDDRALDRMIHG
AFEPDRLLDLIGNFLSYSAEGTGGEADTVKLAKVHQYVAVRQAIAATVSAVATDGRAGVV
WHTQGAGKSEEMLFYTGLTAQIPEIPNPTVLLLTDRIDLDTQLFDTFVKSKSLVTVGGTP
KKATTASQLRALLTRRESSGGIIFSTLQKFRLSTAERDTGARHPLITDRRDLIVIVDEAH
RSHYDLEDGLARNLRDALPQATFIAFTGTPIDNRIGSTLQVFGPTIHTYDLTQAVDDGAT
VPVFYEPILHKVTLPDEIDLDELNARAEGLVEGLSEDEKARAQTYFARFEDLIGAPERIE
SMADTILSHWDTRRREMTKLTGRTGKAMIVCSSRRNAARLFRALAKRRPEWTGTPDPESN
LYPDDSGKIRVVFTGSPGRDPDDIADFVRTPDQLKKIQKRVGNADDELELIIVQSLWLTG
FDAPPLHTMYLDRRMRGAALMQAIARVNRTWDEKPSGLVVDFLGVAKELKHALAEYSEED
QERETIGADISEAVQSVHEMHRKVCEVLNACPWRRTMAATGFRDALADVLELLETAEPNL
EPGQPTRGQRFGHFSRLLSQAFSLCSTHPDVQELLPDIHFFAAVRVSRRKHATEHRQELG
LATEADVRRMIEQLNAETVAADGVVDIYDAAGLTKPDLSHLDEGFVRQLKESRHPNLALK
ALREAIAKEIQEAHPSNIVRQKEFTEKMKSVMNRYHNGLITSAEVADLLVDLARTLSASR
ERAAELGLTEHEMAFYDAIAANPSALKMGQDVLSKIARKLYEQVARDVTIDWRIKSQAQD
RIRAKVKLLLNYFGYPPDEEEGAVDRVLKQTEVIADDLA
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgtccgagcaagattgggagttctacgcgctcgatcagctcgccgagcgcggctggcag
tacgtcccggggaccgcactccggccgcgtgacggccagcgcagaggctgggacgacctc
gtcctgtatccgaggctgcggacggccatcgccacccgctatccgtcgctgccgtcagcc
gccgtcgaagacgcgatcgagaaactgctggccaagttcccggcaaacgaagtgcggctg
aactgggctttctatcagcgcctcaaagccggcgtgaaggtgacctacaccacccccggc
tcccaggaggaacggcacgtcaccgtccgccccatcgacttcgcgaatccccacggcaac
gatctcgtcgccgcgaaccaggttcgagtcaagggcacccgcaaccgagccttaatcttc
gacattgtcctctacatcaacgggctcccgatcgccgtcatcgaactgaagaaggcaagc
ggccccgacgactcccgcgccgccttcgaccagatccagaactaccggcgcgaactcaag
cccgacggcatcttccgcactgtcctactcacgctcgccagcgatggcatatccgcccgc
ctcggcacccccttcaccccgtggcagcacatggccccgtggcatgccgaggaggacgga
accctgctccgctcgcacgagcggcaagacgaccgcgccctcgaccgcatgattcacgga
gcgttcgaacccgaccgccttctcgacctgatcggcaacttcctctcatactctgccgaa
ggaaccggtggcgaagccgacaccgtgaagctcgccaaggtccaccagtacgtcgccgtc
cggcaggcgatcgccgccactgtctccgcggtcgccacggacggcagagccggtgtcgtc
tggcacacccagggcgcgggcaagagcgaggagatgctcttctacaccgggctcacggcc
cagatcccggagatccccaaccccaccgtcctgcttctcaccgaccgcattgacctggac
acccagctcttcgacaccttcgtgaagagcaagagtctggttacggtcggcggcaccccg
aagaaggccaccactgcgtctcagttgcgcgctctccttacccgccgcgagtcgagcggc
ggcatcatcttcagcactttgcagaagttccgtctgagcacggccgagcgggacacaggc
gctcggcaccccttgatcaccgaccgccgcgacctcatcgtcatcgtcgacgaggcccac
cgcagccattacgacctggaggacggccttgcccgcaacctccgggacgcactccctcag
gccaccttcatcgccttcaccggcacccccatcgacaaccggatcggctccaccctccag
gttttcggcccgacgatccacacatacgacctcacccaggccgtcgacgacggcgccacc
gtgcccgtcttctacgagccgatcctgcacaaggtcacccttcccgacgagatcgatctg
gacgaactcaacgccagagccgagggtctcgtggagggtctgagcgaggacgagaaagca
cgcgcccagacatacttcgcccgattcgaggatctgatcggcgcccctgagcgcattgag
tcaatggccgacacgatcctcagccactgggacacgcgccgccgggagatgaccaagctg
accggccggaccggcaaagccatgatcgtctgttcctcgcgccgcaacgccgcccgactg
tttcgtgctctcgctaaacgccggccggagtggacgggcaccccagacccggaatccaac
ctctacccggatgactccggcaagatccgcgtggtcttcactggtagcccagggcgggac
ccggacgacatcgcagacttcgtccgtacccctgatcaactgaagaagattcagaagcga
gtcggcaatgccgacgacgagctggaactgatcatcgtccagtccctgtggctgaccggc
ttcgacgccccgcctctgcacaccatgtacctggaccggcggatgcgcggcgccgctctc
atgcaagccatcgcccgggtcaaccgcacctgggacgagaagccgtccggcttggtcgtg
gacttcttgggcgtggccaaggagctcaagcacgcgctggctgagtactccgaggaggac
caggagcgcgagacgatcggcgcggacatctcggaggctgtgcagtcggtccatgagatg
catcgcaaggtgtgcgaggtcctgaatgcctgcccctggcggcgcactatggcggcaacc
ggcttccgggacgcgctagcggacgttctcgaactcctagagacggcggagcccaacctc
gaacccggtcagcccacgcgaggccagcgattcgggcatttctcccgactgctttcccaa
gcgttttcgctctgctccacccatcctgacgtccaggaactcctcccagacatccacttc
ttcgcagccgtacgcgtctcacgccgcaagcacgccaccgaacaccgtcaagagctcggg
cttgccaccgaggctgacgtgcgcaggatgatcgagcagctcaacgcagagacggtggct
gccgatggcgtcgtcgacatctacgacgccgctggtctcacgaagcccgacctctcccac
ctcgacgagggtttcgtacggcagctcaaggagagccgtcatcccaacctggcgctcaaa
gcgctccgcgaggcgatcgccaaggagatccaggaggctcatcccagcaacatcgtccgg
cagaaggaattcacagagaagatgaagtcggtgatgaaccgttatcacaacggtctcatc
acctccgccgaggtcgcagacctcctcgtcgacctcgcccggacgctgtccgcatcccgc
gagcgtgccgccgaactcgggctcacagaacacgagatggcgttctacgacgccatcgct
gccaacccgtcagcactgaaaatgggacaagatgttctgtccaagatcgcacgcaagctg
tacgagcaggtcgcccgcgacgtcaccatcgactggcggatcaagagccaagcgcaggac
cggatccgcgccaaggtcaagctgctcctcaactactttggttacccgccggacgaggag
gaaggcgcggtcgaccgtgtcctaaaacagaccgaggtcatcgcggacgacctggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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