KEGG   Shewanella putrefaciens 200: Sput200_2140
Entry
Sput200_2140      CDS       T02015                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
shp  Shewanella putrefaciens 200
Pathway
shp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Sput200_2140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shp03400]
    Sput200_2140
DNA repair and recombination proteins [BR:shp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Sput200_2140
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Sput200_2140
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 UB2H DUF724 Ish1 Kinesin AAA
Other DBs
NCBI-ProteinID: ADV54595
UniProt: E6XML4
Position
complement(2427865..2429871)
AA seq 668 aa
MSESVFQLESQFAPAGDQPAAITKLVDGLESGLACQTLLGVTGSGKTFTIANVIAKLGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRQGDSLGQRDMLKRLSEL
QYTRNDIELQRGTFRVRGEVIDIFPADSDRYAIRVELFDDEIERLSEFDPLTGQIIKRIA
RTTVYPKTHYVTPREKILEATELIKEELRERKQYLLDNNKLIEAQRIHERVQYDVEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPSLYELEKSEGEIAEQVVRPTGLL
DPELEVRPVATQVDDLLSEIAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAIGETDRRREKQRAHNLKNGIVPKGVVKRITDVMDV
DDGRDSKAVYGKVAEPKSHYHKADAAELSHQIDQLEKKMHEHARNLEFEQAAAMRDEVKH
LRELLIKA
NT seq 2007 nt   +upstreamnt  +downstreamnt
gtgtcagaatctgtttttcagcttgaatcgcaatttgctcccgctggcgatcagcctgcg
gccattacaaagttagttgatggtttagagtcgggacttgcctgccaaaccttacttggg
gtcacgggatcgggtaagacgtttacgattgccaatgtcattgccaaattaggacggcca
accattattatggcgcccaataaaaccttggcagcgcagctttatggcgagatgaaagag
tttttcccccataatgcggttgagtattttgtctcttactacgattactaccagcctgaa
gcctatgtgcccgcatcaaatacttttattgaaaaggatgcctctgttaatgctcacatt
gaacagatgcgtttgtcggccacaaaagccttattagaacgtaaagatgtagtgctgatt
gcctcagtgtcggctatttatggtttgggtgatcccgattcctacttgaaaatgttgttg
catctacgccaaggtgacagtctgggacaacgcgatatgttaaagcgtcttagtgagctg
caatatacgcgtaatgatattgaattgcagcgcggtacgtttcgcgtgcgtggtgaagtg
attgatatttttccagcagattctgatcgttatgcaattcgggttgagctgtttgatgat
gaaattgagcgtttaagtgaattcgaccctttaacggggcaaatcatcaaacgtatcgca
cgtacaaccgtttaccctaagactcactatgtcacgccaagggaaaaaatccttgaggca
accgagttaattaaggaggaattgcgggagcgtaaacaatatctactggataataataaa
ctgatcgaagcccagcggatccatgagcgggtgcaatacgatgtggagatgatggtcgaa
ttgggctactgctctggtattgaaaactactcgcgctatttgtctggccgcgcaccgggg
gaagggccaccaaccttgctcgactacttacctgccgatggtttactcattattgatgag
tcccatgtgactgtgccgcaaattggcgctatgtataaaggcgatcgttcccgtaaaacc
accttagtggaatatggctttagattaccatcggcattagataatcggccgctcaaattt
gaagagtttgagcagttaatgccgcaaactatttatgtgtcggcgacgcctagcctctat
gagctggaaaagagtgaaggagagatagctgaacaagttgtccggcccacaggattgctc
gatcccgagctggaagtacgccctgtggcgacacaggtcgatgatttattatctgaaata
gccaaacgtgtcgcggtcaatgagcgggtgttagtcaccacactaacaaagcgcatgtcg
gaggatttgactgaatacctcgacgaacatggggtaaaagtgcgttatctgcattcggac
atagacacagttgaacgggttgagatcatccgcgatctgcgcttaggtaagtttgatgtg
ttggtcggcatcaacctattacgtgagggcttagatatgccagaagtgtcattggtgtgt
attttagacgctgataaagagggcttcttgcgctctgaacgctcgcttatccaaaccatt
ggccgcgctgcacgtaacgtcaatggtaaagtgatcctctatgccgatcgcatcactaat
tcaatggctaaagcgataggggaaactgaccgtcgccgcgagaagcaacgtgctcataat
ttgaaaaacggtatagtccccaaaggcgtcgttaagcgtattaccgatgtgatggatgtg
gatgatggccgcgacagtaaagctgtgtatggcaaagtggctgagcctaagtcccattac
cataaagccgatgcggcagagttgagccatcaaatcgatcaacttgagaaaaagatgcac
gaacatgcgcgcaacttagagtttgaacaagcggcggcaatgcgtgatgaagtcaagcac
ctgcgggaattgttgatcaaagcgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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