KEGG   Sesamum indicum (sesame): 105160121
Entry
105160121         CDS       T04135                                 
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
sind  Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:sind00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sind03036]
    105160121
Enzymes [BR:sind01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     105160121
Chromosome and associated proteins [BR:sind03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     105160121
SSDB
Motif
Pfam: RdRP
Other DBs
NCBI-GeneID: 105160121
NCBI-ProteinID: XP_011075687
UniProt: A0A6I9SY51
Position
LG4:6218087..6223935
AA seq 1115 aa
MGKTIQVYGFPYLIAADVVKNFLEQQTGQGTIVALEVKPSKKGPRAYAKVQFTHSRYAEM
IQNLASTRLYYGTSYLRVWESDSDIVHNPRTYVHEMEQVTLNFGCQTSREKFSVLWKVAS
VSVKFGTGMKKMHFLLCHNSVEYKLQLSYENIWQIVLYHPHGQTAKLLLIQLFGAPRIYK
KVSESIYSYFSETQDDQWIRTTDFTPSCIGQASGLCLELPYGMRLPNFQDHFVYYSKSEN
PFHLERGAPFSHNLDLVPILHPPRGFELPYRILFKVCSLVQTGCLPGPKLDARFFQLVNP
QRINTKYVEHALEKLYYLKECCYDPTTWLMEQYEKYRTAKEQPTSPVISLGDGLVYVHRV
QVTPTKVYFSGPEVNVSNRVLRHYSDYIDNFLRVSFVDEEWDKMYSTDLSPRVASADENG
KTKLYERILKTLREGIRIGNKNFEFLAFSSSQLRDNSLWMFAPTNNLNAHYIRQWMGDFR
SIRNVAKYAARLGQSFGSSTETLSVGQHEIERIPDIEAVRGGTKYIFSDGIGKISAEFAR
RVAVRCGVKNSTPSAFQIRYGGYKGVVAVDPTSSVKLSLRSSMLKYQSENTKLDVLAWSK
YQPCFLNRQIITLLSTLGVKDHAFERKQREAVAQLDDILVDPLRAQEALDLMAPGENTNI
LKEMLKCGYKPDGEPFLSMMLQTFRASKLLDLRLKARIFVPQGRQMMGCLDETGTLEYGE
VFVQFSGALRRQFNEESIMFNDYMSEYNYIVKGKVVVAKNPCLHPGDVRVLKAVDVEALH
HMVDCVVFPKKGMRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVSPMDYDPAPTTGLDHD
VTIEEVEEYFTNYIVNDSLGIISNAHTVFADKEESMALSESCLELARLFSIAVDFPKTGV
PAEIPSHLRVKEYPDFMDKPDKTAYESKRVIGKLYREVKDIAPHTTSSKSFTKEVARRSY
DPDMEVDGFKDYIDEAFDYKTEYDYKLGNLMEYYGIKTEAEILSGGIMKTSKTFDRRKDA
EAIGVAVRSLRNEARSWFKKGSESDDPYAKASAWYHVTYHPDFWGSYNEGLKRDHYISFP
WCVYDKLIKIKEDNSRRAPGISSLEWQLGNRLRFI
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgggaaagacaattcaggtgtatggcttcccatatcttattgctgctgatgtggttaaa
aacttcttggagcagcaaacaggccaagggactatagttgctttggaagtgaaaccatca
aaaaaaggtccaagggcatatgccaaagtccaatttacacacagcaggtatgcggagatg
attcagaatttggcaagtacacgcttgtactatggtacttcttatttgagggtctgggaa
tccgacagtgacattgtacacaatcctagaacatacgtgcatgaaatggagcaagtaact
ttgaattttggatgccagacatcaagagagaaattttcagtcctctggaaagtggcaagt
gtttcggttaaatttggaactgggatgaagaaaatgcacttccttttgtgtcataattca
gttgagtacaagcttcagctctcctatgaaaatatatggcagattgtgctataccatcca
catggtcaaactgcaaagcttcttctcatacagttatttggtgcgcctcggatctacaag
aaggtcagtgagtctatttatagttattttagcgaaactcaagatgatcagtggatcagg
acaactgacttcactccatcttgtattggacaagcttctggtttgtgccttgagcttcct
tatggcatgagacttccaaatttccaggaccattttgtttattacagtaaaagcgaaaat
ccattccatttggagagaggtgcccccttttctcataacctggatctagttccaattcta
catcctccccgaggattcgaattgccttacagaatactatttaaggtttgcagtttagta
cagacaggatgtctcccggggcccaagctagacgctagattctttcagttggtcaatcca
cagagaatcaatactaaatatgtagaacacgctctagagaaactctactatttgaaagag
tgctgctatgatccaacgacatggcttatggagcagtatgagaaataccgcacagcaaaa
gagcaaccaacatcacctgttatttctttaggtgatggtctggtatatgtgcacagggtt
caagtaactccaaccaaagtgtatttctctggtccagaagtaaatgtctcaaaccgtgtc
ttacgccactatagcgattacattgataattttcttcgtgtttcatttgtggatgaggag
tgggataaaatgtattcaactgatttatctccaagggtagcttctgctgatgaaaacgga
aaaacaaagctttatgagaggatacttaaaacccttagggaaggaattagaattggaaac
aagaattttgaatttcttgctttctcctcaagccaattacgggataactctctctggatg
tttgctccaaccaataaccttaatgctcattatattagacagtggatgggtgacttccgt
tccataagaaatgtggcgaagtatgctgccagacttggtcaatcctttggttcatccaca
gaaactctaagtgttggtcaacatgagattgaaagaatccctgatattgaggctgtaaga
ggtggaaccaagtatatcttttctgatggaatcgggaagatatcagcagaatttgctcgg
agagttgctgtaaggtgtggagttaagaattctactccatctgcctttcagatcaggtat
ggtggctataaaggagttgtggctgttgatcccacttcatcagtgaagttgtcattgaga
tcaagcatgttgaagtatcagtcagaaaatacaaaacttgatgttctggcatggagcaaa
tatcaaccgtgtttcttgaatcgccaaattatcacacttctatctactcttggtgtcaag
gatcatgctttcgagaggaagcaaagagaagcagtagctcagctggacgatattttggtt
gatccattgagagcccaggaagctctggatttgatggctccgggagaaaatactaacatt
ctcaaggaaatgttaaaatgtggctataagcccgatggtgaaccatttctttcaatgatg
ctccaaacttttcgcgcatcaaagttactggatttacggctgaaagctagaatatttgtc
ccacaaggtcggcaaatgatgggttgcctagatgaaactggcactctggaatatggagag
gtgttcgtgcaattttctggagctttaaggagacagttcaatgaggagtccattatgttc
aatgactatatgtcagaatataattacattgtcaaagggaaggtggttgtggctaaaaac
ccatgcctgcaccctggtgacgtccgtgttttgaaagccgttgatgtggaagcactgcat
cacatggtggactgtgttgttttccccaagaaaggaatgagaccccatccaaatgaatgt
tctgggagtgatttagatggggacatatattttgtttgttgggaccctgacttgattcca
ccaagacaagtctcaccaatggattacgatcccgcaccaaccactggtctggatcacgac
gtgacaattgaggaagttgaggaatacttcaccaattacattgttaacgacagtttagga
atcatttcaaatgctcacactgtctttgctgacaaggaagaatccatggcgttaagtgag
tcctgtttggaactcgctaggttgttctcaatcgctgtcgactttccaaaaactggcgtc
cctgcagaaatcccatctcatttacgtgtaaaagagtaccctgatttcatggacaagccc
gacaagacggcctatgagtccaagcgtgtgattgggaagctttatagggaggtgaaagat
atagctccacatacaacctcttccaagtccttcacgaaagaagtggcgaggagatcatac
gaccctgatatggaagttgatggattcaaagattacattgacgaagcctttgattacaaa
actgagtacgattacaagctgggtaatctgatggagtattatggcataaaaactgaggct
gaaatattgagcggtggtatcatgaagacatcaaaaacttttgatcgaaggaaagatgca
gaagccattggtgtggcagtgaggtcgttgaggaatgaagctagatcctggttcaagaaa
ggaagtgaatcagatgacccttacgcaaaggcatcggcttggtatcatgtgacatatcat
cctgatttctggggttcctacaatgaggggctcaagagggatcactatattagtttcccc
tggtgcgtgtacgacaaactgatcaagatcaaggaggacaactcgagaagggcacccggc
atatcatcacttgaatggcagttgggaaatcgcctacgtttcatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

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