KEGG   Sesamum indicum (sesame): 105167054
Entry
105167054         CDS       T04135                                 
Name
(RefSeq) nuclear pore complex protein NUP88
  KO
K14318  nuclear pore complex protein Nup88
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105167054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105167054
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105167054
SSDB
Motif
Pfam: Nup88 Spc7
Other DBs
NCBI-GeneID: 105167054
NCBI-ProteinID: XP_020550935
UniProt: A0A8M8V3E2
Position
LG7:10886788..10891394
AA seq 662 aa
TIICRTVSVGSEIYFNRNNFIRTLQISWHPYSDTHLGILSSDSVFRIFDLSVDIGQPEQE
YYLQPVEPGNSSNAAAICPVDFSFGGDHLWDKFSVFILFSDGSSYIICPVVPFGSVYKWE
SVLEMYNDAQTFGLKSSNSKAVNNSNMAISWLEATFPELVRQAGDGAQSYAVKAQPFVLL
DASVALQGPLRKVCHNVTEDSEIQKGICEGRAVSCLYNLVGKDSVLVTAWSGGQLKLDAL
ADEIQPVWKMGIAPRLCVDSSDQILGAAMICESAPSDRSVLKLDQPPHLTAWLGHPPPLL
RLAIVDLALPDKCNSLIAMMTDPLVPERIFCVHAGGIDSIVLHFLPFTNQTSSKEESMRT
PSVLSVLSTCPGDSSSPSPLHGFLALSDSFGSSWIVGLTSSNDCIVLQMDTWNVLLTDAV
EKVTEAGTVDELKETDTQTIISKELLSGPKAVLLPPSAPSLRSVTADSIEGRSMLHQYFK
LFHENYVEYAHKVYFELQHHAPQLKKIIDNQHSRLREMEQKLLEVERKKEKIEDRIDRAV
KVHSSLEERLQNLRSLPGSHKKPLSKAERDFKLELDNFTGLELDALHSSIEALHGRLRRH
MHSPQQADSPNRQTVRKGNKRIQEDEISQLKSSLEKLSLINSENSRKVKLVESALRSREI
SD
NT seq 1989 nt   +upstreamnt  +downstreamnt
accatcatctgccggactgtttcggttggttcagaaatttacttcaacagaaacaatttc
atacgcactctgcagatttcttggcacccttacagtgatacgcacttgggaatcttgtcc
tctgattctgttttcagaatatttgatttgtctgtggacattgggcagccagaacaggaa
tattatttgcaacctgtagaacctggcaattccagtaatgctgcagcaatatgtccagtt
gatttctcttttgggggggatcatttgtgggataaattcagtgttttcatcttgtttagt
gatggatccagttacataatctgccctgttgttccttttggaagtgtgtataagtgggaa
tcagttctggaaatgtataatgatgctcagacattcgggctaaaatcttccaattcaaaa
gctgttaataattctaatatggcaatctcttggctggaggcaacatttccagaattagtt
cgtcaagctggagatggtgcacaatcgtatgcagttaaagctcagccttttgttttattg
gatgcatcagtggcattgcagggacctctgcgcaaagtatgccataatgtgacagaagat
tctgaaattcaaaaaggaatatgcgaagggcgtgcagtcagttgtctctacaatttagtt
ggcaaagattcagttcttgtgactgcttggagtggtgggcaattgaaactggatgcttta
gctgatgaaattcagccagtttggaagatgggtattgcaccccgtctttgtgttgattca
tctgatcagatacttggtgctgctatgatttgtgagagtgctccaagtgatcgctctgtt
ttgaagcttgatcagcctcctcatcttactgcttggttgggccatccacctcctctgctg
aggttggccatcgtggatttggctttgcccgataaatgtaattctctgattgcgatgatg
actgatcctcttgttcctgaaagaatattttgtgttcatgctggagggatagattcaatt
gtcttgcattttctccctttcactaaccagacaagtagcaaggaagagtcaatgagaact
ccatcagttctttctgttcttagtacatgcccaggcgactcatcctcaccatcacctctt
catggtttcttggccttgtcagattcatttggaagttcatggattgtgggacttacctct
tctaatgactgtatagtgctacagatggacacttggaacgtgttgcttactgatgctgtt
gagaaggtgacagaagctggtactgtagacgagctaaaagagactgatacacagacaata
atcagcaaagaactccttagtgggcctaaggcagttctattgcccccttctgcaccaagt
ttacgctctgtcactgctgattctattgaagggaggtcaatgcttcatcagtatttcaag
ctatttcatgaaaattatgtggagtatgcacacaaggtgtactttgaactccagcatcac
gcacctcaactgaagaaaataattgacaaccagcattcccggctacgagaaatggagcag
aagcttttggaagttgaaagaaagaaggaaaagatagaggaccgcatagaccgagctgtt
aaggttcatagttccctggaagaacggttgcaaaacttgaggagcctgcctggatcacac
aagaagccactttcaaaagctgagagagatttcaagttggaacttgataatttcactggg
ttggagttggatgcgttgcactcctccattgaggctctacatggcaggttgagaagacac
atgcattctccacagcaggctgattccccaaacagacaaacagtgagaaaagggaacaag
aggattcaagaagatgaaatatctcaactaaaatcttcacttgaaaaactgtcactgata
aacagcgagaacagcaggaaggtaaaacttgttgaatctgcattgagaagcagggaaatc
agtgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system