KEGG   Setaria italica (foxtail millet): 101760666
Entry
101760666         CDS       T02818                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101760666
   03009 Ribosome biogenesis [BR:sita03009]
    101760666
Enzymes [BR:sita01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101760666
Spliceosome [BR:sita03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101760666
Ribosome biogenesis [BR:sita03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    101760666
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DAO_C
Other DBs
NCBI-GeneID: 101760666
NCBI-ProteinID: XP_004962666
UniProt: K3Z3Z9
Position
III:complement(40318714..40331573)
AA seq 790 aa
MDPSFRFDPDGSDDEAAAAPSARRKAAAQSPWEFSSYAESVAAEHARRRTTSIDEKISQL
RQGRAKPVLSDDSESGSGEDDSDEEEVEGESGDEEDELEESEDEEEEVEGSGDEVEEEVE
GSDEEEGGEVEGEEEGNEQGEEEEEGAHEEEDTAEQDGATGTVDPSKFFASSEGASFHAN
SFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLE
RLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSSKIQEVALRS
MPDIVVATPGRIIDHVRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIRMCPKRRQT
MLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEFVRIRRARESNQEAVLLALC
LKTFKQSVIIFSGTKLSAHRLKIIFGLNGMKAAELHGNLTQAQRLEALELFKKQEVDFLI
ATDVAARGIDIVGVRTVINFACPRDVKTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAI
AKKAGSQLKSRIVAEKPVADCAKLIEQLEDQISTIIREEREEMLVRKAEMELAKVENMMA
HKDDIYSRPKKTWFTTEREKKLLAKAAKDCLDQGKTTSGVISAKQAEELRLKEKRRRENE
KNLPRKKRRRLEAQREMLEGDDEDDEEAKENNKGGKKAKKGQSVVDVAYRKAKSMKATIR
RGPGAGKGKNEKNSRQHSEKAPTRQEEMHDLFQNDMSEWKQGRALKKNNDFARKKSKNAF
KSKARYKRRK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggaccccagcttccggttcgacccggacggctccgacgacgaggccgcggcggccccc
tccgcgcggcgcaaggccgcggcgcagtcgccgtgggagttctcgtcctacgcggagtcc
gtggcggcggagcacgcgcgccgccgcaccacttccatcgacgagaagatctcgcagctg
cgacagggccgcgcgaagcccgtcctctccgatgactccgagagcgggagcggggaggac
gatagcgatgaggaagaggtggagggggagagcggggatgaggaggacgagctggaggag
agcgaggacgaggaggaggaggtagaggggagcggcgatgaggtggaggaggaggtcgag
gggagcgacgaggaggagggcggcgaggttgagggggaggaagaaggaaacgagcaggga
gaagaggaagaggagggtgcccatgaggaagaagatacggccgagcaggatggtgcaact
ggcactgtggatccttctaaattttttgcttcttcggagggagcatcattccatgcaaat
tcgttccttgagctcaacttgtcccgcccactagtccgagcttgcgaagcacttggctac
cagaaaccaactccgattcaggctgcttgcatacctttggcattaactggaagggacata
tgtggtagtgctataacaggatctggaaagacagctgctttctctttacctgtgctggaa
cgtctacttttccgaccaaagcgtgtacctgcaattagggtgcttattcttactcctacc
agagagttggctgctcaggtccatagtatgatcgagaagttggcccagtttactgatatt
agatgttgtctcattgttggaggactttcatctaagattcaagaggtagctctaaggtca
atgcctgacatcgttgtagcaactcctgggcgtataatagatcatgtacgcaattctctc
tctgttgggcttgaagatctagctgttgtgatccttgacgaggctgaccgtttgctagaa
ctgggtttcagtgctgaaatacaagaactgattcgcatgtgtcctaaaaggaggcagact
atgcttttttctgctacaatgacagaagaaattgatgaacttgtaaaactttcactaaac
aagcctgtccgtcttgaagctgatccttctctgaaacggcctgcaacgttgactgaagag
tttgtaagaatacgacgagcacgcgaatcaaatcaagaagctgttctacttgcactctgt
ttgaagactttcaagcaaagtgttatcatctttagtgggacaaagctatctgcacacagg
ctaaaaataatatttggtctcaatggcatgaaagctgctgaacttcatggcaaccttaca
caggcccagcgacttgaggctttggaacttttcaaaaaacaagaagtggacttcctgatt
gcaactgatgttgctgctcgtgggattgacattgttggtgttcggaccgtaataaatttt
gcttgcccacgagatgtgaaaacatatcttcatcgtgttggccgcacagcacgggcaggc
agagaaggatatgctgtgacatttgtaacagatgatgatagatccctcttgaaagcaatt
gcaaagaaagctggttcacagttgaaaagccgcatcgttgcagagaaacctgtggctgat
tgtgcaaaactgattgagcaactagaagaccaaatttctaccatcattcgagaagaaagg
gaggaaatgttagtgaggaaagctgaaatggaacttgcaaaggtagaaaatatgatggct
cataaggacgatatatactcacggccaaagaaaacctggtttactactgaaagagaaaag
aagcttttggccaaggcagctaaagattgtttggaccaaggtaagaccacctctggagtt
attagtgcaaaacaagctgaagagctccgtctgaaggagaaaaggagaagagagaatgag
aagaatttacctaggaagaagcgccgaagattagaggcacagcgggagatgttagaaggt
gatgatgaagatgatgaggaagcaaaggaaaataataaaggagggaagaaggcaaagaaa
ggccaatctgtagtggatgtggcttaccgtaaggccaaatcaatgaaggcgaccattaga
cgcggtcctggtgcgggcaaagggaagaatgagaagaattcaagacaacattctgagaag
gccccgactaggcaggaggaaatgcatgatctgttccagaacgatatgagtgaatggaaa
cagggacgcgccttgaagaaaaacaacgattttgcccgcaagaaatccaagaatgctttc
aagagtaaagcaaggtacaagcgccgaaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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